Protein

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Genbank accession
XRX14376.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPAGIEVIDQGGTNAALLTSDNTFFRLEGKGSFWAPGAPNGEYNYSIVNIDIPFSGNWNDSPCLAIRCGRAVSYYVRSIDSGVIRYTFSCSPNQTVEWWLFSRRGPGWSNSGIQIFHGDGSLAYDAGTPVMFPLGDQFDQQHWGRTIGVILANYHTEYEYTLDSWDDPDTYLFNRYETWVRSIEGCYVEGNAAKYGAVSWARITDSGHIYRDWQGSGGNFIESGSTNILVVDLTGI
Physico‐chemical
properties
protein length:236 AA
molecular weight: 26255,61180 Da
isoelectric point:4,56675
aromaticity:0,14831
hydropathy:-0,29280

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX14376.1
1 236
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8130
Central domain 11 209 200 0,0025
C-terminal 210 236 26 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-236

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Yut4
[NCBI] 		3400889 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX14376.1 [NCBI]
Genbank nucleotide accession
PV130726 [NCBI]
CDS location
range 23284 -> 23994
strand +
CDS
ATGCCTGCTGGTATCGAAGTTATTGACCAGGGTGGGACTAATGCTGCACTTCTCACGTCCGACAACACCTTTTTCCGATTGGAAGGAAAGGGTTCATTTTGGGCACCGGGTGCGCCTAACGGAGAGTACAACTACTCGATAGTCAACATAGACATTCCCTTCAGTGGGAACTGGAATGACTCCCCATGTCTAGCCATTCGTTGTGGGAGAGCGGTTAGCTACTACGTTCGCAGCATAGACAGCGGGGTTATTCGTTATACGTTCTCATGCTCCCCTAACCAGACTGTCGAATGGTGGCTGTTCAGCAGGCGTGGCCCAGGCTGGTCTAACTCAGGAATTCAGATATTCCATGGGGACGGTTCGCTGGCGTATGACGCGGGTACACCTGTGATGTTTCCGCTCGGGGACCAATTCGACCAGCAGCATTGGGGTCGAACCATTGGAGTAATCCTGGCCAACTATCACACTGAGTACGAATACACCCTCGATAGCTGGGACGATCCTGACACATACTTGTTTAACAGGTATGAGACGTGGGTTCGTTCGATTGAAGGGTGCTACGTTGAAGGCAACGCGGCCAAGTACGGTGCTGTCAGCTGGGCGCGAATTACTGACTCGGGTCACATCTACCGTGACTGGCAGGGTTCAGGAGGGAACTTTATCGAATCAGGTAGTACCAACATTCTAGTGGTTGATCTTACCGGGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bf1a480ce6c6dcd954f25f917d65392d47bfd65641aeb0650a81eb9f2e0c4d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50