Protein

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UniProt accession
A0A8S5S9S3 [UniProt]
Protein name
YadA-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNKLVLATMIMGVIGGNVFANGVVTGPVEPNTQAPVVSGYNSVAVGANTVVTGTNTIAIGRDNKVTGNDSVVIGGGNGTIGADQASVIGYNNYVGNNKEQTVLGANNTVDNQGAIVVGTHSVVRGIDAVVIGNNASAPIQNSVAIGTNSQTDNPVGVRQVVLNGVTHVFAGENPNSVVSFGSKKSDTYSGISNYNRQLHNVSAGRVDPSSLDAVNGSQLFAAYDEIETNGTHIAKLQKDVNCLDKRVTRNTTNISNLTSKVDNGFTTINNTLNATNERVGQNSQAILNNTDRINSHETRITDLERNTVGQISNVMHEVAKAGASNAALSALHYLGYNSDDKLTFAVGYGHYKNANDVALGMFYAPTEHVMFSLGATLANKMINAGVSFRLGKGSEYETNHKGKIKQLEELVNQLVAEVEELKAGK
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44663,08740 Da
isoelectric point:6,20639
aromaticity:0,04941
hydropathy:-0,22047

Domains

Domains [InterPro]
IPR011049
STR
25–221
IPR011049 G3DSA:3.30.1300.30 Coil
IPR011049
STR
25–220
IPR011049 G3DSA:3.30.1300.30
IPR011049
STR
36–223
IPR011049 IPR045584
cd12820
STR
38–152
cd12820 IPR005594
IPR008640
Unmapped
38–61
IPR008640 IPR008640
A0A8S5S9S3
1 425
Architecture
STR
RBD
ATT
STR 25-223 | RBD 224-335 | ATT 336-390 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5S9S3
1 425
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,4546
Central domain 43 330 289 0,6424
C-terminal 331 425 94 0,4528
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-330
C-terminal
331-425

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctiVc2
[NCBI] 		2827745 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF47733.1 [NCBI]
Genbank nucleotide accession
BK032558 [NCBI]
CDS location
range 31158 -> 32435
strand -
CDS
ATGAATAAATTAGTATTAGCAACAATGATTATGGGTGTAATTGGTGGCAATGTGTTTGCAAATGGTGTAGTTACAGGCCCAGTAGAGCCTAACACACAAGCACCAGTAGTAAGCGGTTACAATTCCGTAGCCGTAGGGGCAAATACAGTAGTTACAGGCACAAATACAATTGCAATTGGCCGTGATAATAAAGTAACGGGAAATGATAGCGTTGTAATTGGCGGTGGCAACGGAACAATCGGAGCTGACCAAGCAAGCGTAATTGGGTATAACAATTACGTAGGCAACAATAAAGAACAAACTGTATTAGGTGCTAACAATACTGTAGACAATCAAGGCGCAATCGTAGTAGGTACACATAGCGTAGTGCGTGGTATTGATGCGGTAGTTATTGGTAATAACGCATCAGCACCTATTCAAAATTCCGTAGCGATTGGTACAAACAGTCAAACGGATAACCCTGTAGGTGTTCGACAAGTTGTATTAAATGGGGTAACTCACGTGTTCGCAGGTGAAAATCCTAATAGCGTAGTATCCTTTGGTAGTAAGAAAAGCGATACATACAGTGGAATTAGCAATTACAACAGACAACTGCACAATGTAAGTGCAGGCCGTGTAGACCCTAGTAGTTTAGATGCAGTAAATGGTAGCCAGCTATTTGCAGCATATGACGAGATTGAAACAAACGGCACACACATTGCAAAACTTCAAAAAGATGTGAACTGTTTAGACAAACGAGTTACACGAAATACTACAAATATCTCTAATTTAACCTCTAAGGTGGATAACGGATTTACAACGATTAATAACACTCTAAACGCTACAAATGAGCGTGTAGGGCAAAATAGCCAAGCCATTTTAAACAATACGGATAGAATTAATAGCCATGAAACACGTATTACAGATTTAGAACGAAACACAGTAGGTCAAATCTCAAACGTGATGCATGAAGTAGCAAAAGCTGGTGCATCTAATGCAGCACTAAGTGCGTTGCACTACCTAGGCTACAATTCTGATGATAAATTAACATTTGCGGTTGGATACGGCCACTACAAAAACGCAAATGATGTAGCACTTGGAATGTTCTATGCACCAACTGAGCATGTAATGTTTAGCTTGGGTGCTACACTAGCCAATAAGATGATTAATGCAGGTGTATCCTTTAGGCTTGGTAAGGGTAGTGAATACGAAACTAACCATAAAGGCAAAATTAAACAACTTGAAGAGTTGGTAAATCAATTAGTAGCGGAAGTTGAAGAATTGAAAGCTGGTAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0019867 outer membrane Cellular Component IEA:InterPro (UniProt)
GO:0015031 protein transport Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
eb18434ce51afed1fd6b72fa241802f6e8885da67d287764a89fccfd94920a2d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8776
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50