Protein

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Genbank accession
QIG74786.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MPGQSDNIILTTAGLNYLKARKQAGQKAVIQRFRIGDEYRFIPSEADTAIHGNQVYEGLAMEQMWWIQYSPDEIVVRCRVDSDKGDFLIGNLGLYTDTNELLFIRNFAYQHHKMHTTDKAPGGRWTFQLRIMTPNVLDLFDMSSIEQRYADMNERLLSDADTPSHPFDSFYTEIQLNDAFLPTNRSGYMTLSGRTSRSWYSPMFQMAESNVIVFDRYELSGGEASDRHQAIW
Physico‐chemical
properties
protein length:232 AA
molecular weight: 26776,74100 Da
isoelectric point:5,21972
aromaticity:0,12069
hydropathy:-0,49397

Domains

Domains [InterPro]
DC_1371
STR
3–110
DC_1371 DC_2244
IPR022225
ATT
8–117
IPR022225
QIG74786.1
1 232
Architecture
ATT
STR
ATT 3-117 | STR 118-232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I42
[NCBI] 		2509736 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74786.1 [NCBI]
Genbank nucleotide accession
MN988540.1 [NCBI]
CDS location
range 83529 -> 84227
strand -
CDS
ATGCCCGGACAATCAGACAACATTATTCTTACCACAGCGGGCTTGAACTATCTCAAGGCTCGCAAGCAGGCTGGTCAGAAGGCGGTCATTCAGCGCTTTCGCATTGGTGACGAGTATCGCTTTATACCAAGCGAAGCCGATACGGCGATCCATGGCAATCAAGTCTATGAAGGGCTTGCCATGGAGCAGATGTGGTGGATTCAGTATTCGCCGGATGAAATCGTCGTGCGTTGCCGCGTCGATAGCGACAAGGGCGATTTCCTTATCGGCAATCTCGGTCTTTATACCGATACCAATGAGTTGCTGTTCATTCGCAACTTCGCCTACCAACATCACAAGATGCACACCACGGATAAAGCGCCGGGTGGTAGGTGGACGTTCCAGCTTCGCATCATGACGCCGAACGTGCTTGATCTCTTCGATATGTCGAGCATCGAGCAGCGTTATGCAGATATGAATGAGCGGCTGCTTTCCGACGCCGACACGCCATCGCATCCGTTCGATAGCTTCTACACCGAAATTCAACTCAACGACGCGTTTCTACCAACGAACCGTTCCGGCTACATGACGCTTTCAGGCCGCACGTCGCGTTCGTGGTATTCGCCAATGTTCCAGATGGCAGAGTCCAACGTCATAGTCTTTGATCGCTACGAGCTTTCAGGCGGCGAGGCATCTGATCGTCATCAAGCTATCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c4f5647d352718de525560a4f29c774d857e5b75ccb849125f136f3f06e44dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank