Protein
View in Explore- Genbank accession
- QZA71167.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MASGCGDVLSLEDLKTAKTNQIFEAEVITGKSGGLASGSDIDYATNQNTGQVQKTLPAILRDVGFEPASFTFQSGGVLGVNDANKVVYDSVSKAWYSWAGALPKTIPAGSNPLADSNWRPRTDPNLRDDLLNTAAVGLGDALVGVKSTLATSVARTQHDKNAESISVRDFGATGNGSTDDSAAFALAAKAVIAKDLAPPVYAPVAHAPFCEVLVPAGVYLLSSVVDTGGRTVSWVCDAGATFVNPNNLNGRIFRPGVRNNNIMHHGTLDGACSFSVSANRGAEAPAQVLGVIAPDQIATYVDRDSVGLHAENYAPAILGSTTTGTYTPTSVTFAAALSPDQLKKLRTGMVIDTKHTPTKYSGILTGWAADGLSLTVEGWYFADGLATSHAKVTPANGTGVNINPFTKAWAMNANVFMDSNSHAVAAVGLELGVSNEKFDYDPVTDTWHTWCYDAITLGSKRCETAYMQRGYYYKGYESRGATGYGFTGKNANGIWPSVATYHSQANSDFQILFQPDVYGNKTTFAVTKEGNIEMGRRDTAATATLDFHSSGNDIDYDARISATGGNTTPGNGTLTLAAISVNLSPGYIAEFNSFRPSTDAAKTLGLPQFRYNIVYASTGTINTSDVTTKTFLDIEQAEKEAAKEIKGMIRKFQFNDAVSDKGGDKARYHFGVGAQYVRDVLVKHGLNSDMYAFLCYDKWEDEYEDIYEDVEVEREVAGKADEPVIVGGEQVGTRQVDVTYVVKVKETRATGEKKLVREAGELYGIRYDELLCFIISAM
- Physico‐chemical
properties -
protein length: 778 AA molecular weight: 83269,84140 Da isoelectric point: 5,14839 aromaticity: 0,09383 hydropathy: -0,21774
Domains
Domains [InterPro]
DC_0138
STR
7–757
STR
7–757
G3DSA:2.10.10.80
ATT
69–119
ATT
69–119
IPR040775
RBD
78–112
RBD
78–112
IPR030392
CHP
624–778
CHP
624–778
cd10144
CHP
624–778
CHP
624–778
1
778
Architecture
STR 7-68 | ATT 69-119 | STR 120-757 | RBD 758-778
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
778
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 181 | 181 | 0,9918 |
| Central domain | 182 | 526 | 346 | 0,9356 |
| C-terminal | 527 | 778 | 251 | 0,9657 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-181
1-181
Central
182-526
182-526
C-terminal
527-778
527-778
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pantoea phage AH01 [NCBI] |
2869571 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QZA71167.1
[NCBI]
Genbank nucleotide accession
MZ501269.1
[NCBI]
CDS location
range 28875 -> 31211
strand +
strand +
CDS
ATGGCTAGCGGATGCGGTGACGTTTTGTCACTTGAAGACTTAAAAACAGCAAAGACTAACCAGATTTTTGAGGCGGAGGTTATCACTGGTAAGTCTGGCGGCCTTGCCTCCGGTTCTGATATTGATTATGCAACTAACCAAAACACGGGGCAGGTGCAAAAAACTTTGCCTGCTATCTTGCGTGATGTTGGTTTTGAGCCTGCCAGTTTCACCTTCCAGTCTGGAGGTGTGCTCGGTGTAAACGACGCCAACAAAGTGGTTTATGACAGTGTCAGCAAAGCGTGGTATTCCTGGGCGGGGGCATTACCAAAAACAATCCCCGCGGGCTCCAACCCGCTAGCCGATTCAAACTGGAGACCCCGCACAGACCCAAACCTACGCGACGATTTATTAAACACCGCTGCCGTGGGGCTGGGCGACGCTTTAGTTGGGGTTAAATCGACACTCGCAACGTCTGTGGCCAGAACACAGCACGATAAAAACGCCGAATCAATTTCAGTCAGAGATTTCGGCGCAACCGGCAACGGCTCTACCGACGATTCTGCCGCTTTCGCTTTAGCTGCTAAAGCTGTTATCGCTAAAGATTTAGCGCCTCCGGTTTATGCGCCGGTTGCCCACGCGCCATTCTGCGAGGTTTTAGTTCCTGCTGGGGTTTATTTGCTCAGTTCTGTCGTAGACACTGGCGGTCGGACAGTATCCTGGGTTTGCGACGCCGGGGCGACTTTTGTTAACCCAAACAACCTGAATGGTCGAATTTTCCGCCCAGGTGTAAGAAATAATAATATTATGCACCACGGGACTCTGGACGGTGCTTGTTCGTTTAGTGTCAGTGCTAACCGTGGTGCTGAAGCTCCGGCGCAGGTTCTTGGTGTAATCGCCCCCGACCAGATTGCGACTTATGTCGACCGCGACTCAGTTGGTCTGCACGCAGAAAACTACGCACCGGCAATCCTTGGGTCAACGACTACGGGTACTTATACGCCAACTTCGGTTACTTTTGCTGCCGCCTTAAGCCCCGACCAGCTTAAGAAATTGCGTACGGGCATGGTGATTGACACTAAACATACGCCTACTAAATACTCCGGCATTCTCACTGGCTGGGCGGCAGACGGTTTGTCTCTTACCGTAGAGGGTTGGTATTTTGCCGATGGGTTGGCGACGAGTCACGCAAAAGTAACACCCGCAAACGGGACGGGGGTTAACATTAACCCGTTTACTAAAGCGTGGGCCATGAATGCGAACGTGTTTATGGATTCCAATTCTCACGCAGTTGCTGCCGTGGGGCTTGAGCTCGGCGTTAGTAACGAGAAGTTCGACTACGACCCGGTGACCGATACGTGGCACACATGGTGCTATGACGCAATTACACTCGGTTCAAAGCGTTGTGAAACTGCTTATATGCAGCGTGGGTATTACTACAAAGGATATGAAAGCCGTGGCGCAACCGGCTACGGGTTCACCGGTAAAAACGCCAACGGTATCTGGCCTTCGGTCGCCACGTACCACAGCCAGGCTAACTCAGATTTTCAAATTCTGTTCCAGCCAGATGTTTACGGCAATAAAACAACGTTTGCCGTAACTAAGGAAGGGAATATCGAGATGGGGCGTCGGGACACCGCGGCGACCGCAACTTTAGATTTCCACTCATCTGGCAACGACATTGATTACGATGCGCGCATTTCAGCGACAGGAGGCAATACGACGCCCGGCAACGGCACCTTAACCCTTGCAGCTATCAGTGTTAACCTGTCGCCGGGTTATATTGCCGAATTCAACAGCTTCCGCCCGTCAACTGACGCGGCGAAAACCCTGGGGCTTCCGCAATTCCGCTATAACATCGTTTATGCTTCAACAGGTACTATAAATACTTCGGATGTGACGACTAAAACATTCCTTGATATTGAGCAGGCGGAAAAAGAAGCGGCAAAAGAAATAAAGGGAATGATTCGTAAATTCCAGTTTAATGACGCTGTGTCTGATAAAGGCGGAGATAAGGCGCGATATCACTTTGGTGTTGGGGCCCAGTACGTTCGTGATGTGCTGGTAAAGCATGGACTTAACTCCGATATGTACGCGTTCCTGTGTTACGACAAATGGGAAGACGAATACGAGGATATTTATGAAGATGTTGAGGTTGAGCGAGAAGTGGCCGGGAAGGCGGATGAACCAGTTATCGTGGGCGGGGAACAAGTAGGTACTCGCCAGGTAGACGTAACTTATGTGGTGAAAGTTAAAGAAACCCGTGCAACAGGTGAAAAGAAGCTGGTGCGCGAAGCGGGCGAGTTGTACGGCATCCGGTATGATGAATTGTTGTGCTTTATAATTTCAGCTATGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
a1d0ba097085e1a26dc31c71a879d396cd448cf005baa2498e7d302abe40f9b3
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50