Protein

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UniProt accession
A0A5P8D5C1 [UniProt]
Protein name
Tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLVQLIDSTVDLRKELIQPDGAYLSGLGASTVGVLLDATRKLSYYGNDRQALIDLLLHAKGTGSPIDIDVPVLIDTPINIDFEYIPLIMSCSSGRLLSDSTALVLNHLGYGSTINSFDMWNVTAPWAITRWGSTGDWNTSEEAVASLVQTNAPHYYQPTVNDADVWSTLTPEQQNQNISPKLEIHNSDGVVLSMPRGRYALYEFYGCNYCRVFNPSLSGGKGVLGTIVFNNTNSTDYGTDNWVVGGDIRNGSFSGVVHLRNKRGGAINCSPYRSGESGIKTYQNELNGVSARCYEMTYTNCHVKQALYDGLDLASDYGAVSERVADLSLAEAPWQELPTKHTVIGCSGFNCGGNALHIDGTGNTVIGMKASLSGLSGVHDDGTRSVYNDVVSVNNARNNISHQVTLSKSQVINGITLVLDAATGTNFGYGVYAPFSNTKGMDTSLVASGTVVPFIVKAQTTADGDLTVGHSAAPDRICRVLGNPELGLTSTPIMALTSLATGTPSAPSGNVYLNSHYLGSEVPGFQVLGVSGGGGLVSTLNSAYVTQVGNSQASFVFHGSSLSIVARDAAGVLRQYALTGVPV
Physico‐chemical
properties
protein length:584 AA
molecular weight: 61797,40460 Da
isoelectric point:5,24757
aromaticity:0,07705
hydropathy:-0,03048

Domains

Domains [InterPro]
IPR012332
STR
38–582
IPR012332
IPR012332
STR
40–582
IPR012332
IPR015331
RBD
79–444
IPR015331
IPR011050
STR
81–442
IPR011050
A0A5P8D5C1
1 584
Architecture
STR
STR 38-582 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A5P8D5C1
1 584
Domain Start End Length (AA) Confidence
N-terminal 1 51 51 0,9775
Central domain 52 464 414 0,9812
C-terminal 465 584 119 0,9085
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-51
Central
52-464
C-terminal
465-584

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage CX5
[NCBI] 		2652426 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kotilavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93592.1 [NCBI]
Genbank nucleotide accession
MN270887 [NCBI]
CDS location
range 30536 -> 32290
strand +
CDS
ATGAGTTTAGTACAGTTAATAGATAGTACTGTGGATTTACGTAAGGAGTTAATACAACCTGACGGTGCATACCTTTCGGGTTTAGGTGCTTCTACAGTTGGTGTCCTTCTTGATGCTACGAGAAAGTTATCCTACTACGGTAACGATAGACAGGCTCTTATTGATTTGTTGTTGCATGCTAAGGGTACAGGTAGCCCCATTGATATTGATGTACCTGTACTTATTGATACGCCTATTAACATAGACTTTGAGTACATACCCCTAATTATGAGTTGTTCATCTGGTAGATTATTATCAGATAGCACTGCCCTTGTACTCAATCACTTGGGTTACGGTTCCACTATTAATAGTTTTGATATGTGGAATGTAACAGCACCTTGGGCTATTACTAGGTGGGGTAGCACTGGTGACTGGAACACATCTGAGGAAGCCGTTGCATCACTAGTACAGACAAATGCCCCACATTACTATCAACCAACGGTTAATGATGCTGACGTATGGTCCACACTTACGCCTGAGCAGCAGAACCAAAACATTAGCCCTAAACTTGAAATTCATAACTCAGACGGTGTTGTACTGAGTATGCCAAGGGGTAGATACGCCCTGTATGAGTTTTATGGTTGTAATTACTGCCGTGTGTTCAACCCTAGTCTGTCGGGTGGTAAGGGCGTGTTGGGTACTATAGTATTTAATAATACCAACTCTACGGACTACGGTACTGATAACTGGGTGGTCGGTGGTGATATTAGGAACGGGTCTTTCTCTGGGGTAGTGCACTTACGTAATAAGCGAGGCGGGGCGATTAATTGTAGTCCCTATCGTTCTGGTGAGTCGGGTATCAAAACATACCAGAACGAGCTAAATGGCGTATCCGCGCGCTGTTATGAGATGACGTACACCAACTGCCATGTTAAGCAGGCGTTATATGATGGTTTAGACTTAGCATCTGACTATGGTGCAGTGTCTGAGCGTGTTGCTGATTTATCATTAGCAGAAGCGCCATGGCAGGAGCTACCAACAAAACACACTGTGATTGGTTGTTCTGGTTTTAATTGTGGTGGTAATGCTTTGCATATTGACGGTACAGGTAATACTGTTATAGGTATGAAAGCTAGTCTTAGTGGTTTATCCGGTGTACATGATGATGGTACACGTAGTGTGTACAATGATGTTGTGTCAGTAAACAACGCACGTAATAATATATCCCATCAGGTTACACTATCTAAGAGCCAAGTTATTAATGGTATTACGCTGGTACTAGACGCCGCTACAGGTACGAATTTCGGGTATGGTGTGTACGCTCCTTTCTCTAACACTAAGGGTATGGACACCTCGTTAGTCGCGTCAGGGACTGTAGTACCCTTCATAGTCAAGGCACAGACTACGGCTGATGGTGATTTAACAGTAGGGCACTCTGCGGCACCTGACCGTATTTGTCGTGTACTAGGTAATCCTGAGCTTGGTTTAACTAGTACTCCTATTATGGCTCTTACATCCCTCGCTACTGGTACACCATCCGCACCTTCTGGTAATGTGTATTTGAACTCACACTACCTAGGGTCTGAGGTTCCCGGTTTTCAGGTACTAGGAGTAAGTGGCGGAGGTGGTTTAGTGTCAACACTCAACAGTGCGTACGTTACACAGGTAGGTAACTCACAAGCCTCCTTTGTGTTTCACGGCTCATCCTTGAGTATTGTAGCGAGGGACGCCGCAGGCGTATTGCGGCAGTACGCACTCACTGGTGTGCCTGTGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098994 symbiont entry into host cell via disruption of host cell envelope Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
6a6d24b8aeb71c8137a3649417b364f4928b9bb4a4abb11ac3da5f315d586356
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6033
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50