Protein

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Genbank accession
QPZ53414.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTISTTTIKNSYSGNNSTSAFNYTFKIAAASEMQVIIRSSSGTETVKTLTTHYTISGINNSGGGAVTFTSGNIPASGETVVLRRVTAQTQAMDLIDNDPMSADTIETAHDKSIAIAQELQEQIDRSLKLSRTNTMTSTEFTIDATNRAGKVLGFDTTGELAVTSEIGTNRGNWSASTSYAIRDIVKDTSTNNIFMANTVHTSSGSQPLTTNTDSAKWDLLVDAASATTSATNAATSATAAGNSATAAANSATAAASSETAAASSASTASTQATNAANSATAAASSATAAAGSASAAAATFDLFDDAYLGAKSSNPSVDNDGDALADGALYFDTTNDVMKVYDLGTTTWLQLTPTVSNQNNINAVNSNSANINTVASDLSGSNNIGAVAGNATNVNLVGGSIANVNNCGNNIASINTAATNLADINAFANIYLGPSSSAPTQDPDGSALDVGDLYFDTSSDTLKVYKSGGWAAAGSTVNGTSKRFKYTASGGQTTFTGSDDNSETLAYDAGFIDVYLNGVRLVNGVDCTVTNGTSIVLASGASASDVLEAVAFGTFELANIQANDLTDVNTSGVADGQVLVYSSANSRFQPGNASSAEVYGFNLSFVASTVNYTVDVQSHGGSNKYFILGYPQRTLELEEGNTYVFSYPSAHPFALSTTSNGSHGGGSEYTTGVTRDSSANTLTYVVPTGAPTLYYYCTSHSNMGGQANTPAPLDNNLQLTTTNQGQDNISNAQYAAFDDVLFSASGFSFSLSNGSLIATI
Physico‐chemical
properties
protein length:760 AA
molecular weight: 77849,22680 Da
isoelectric point:4,24629
aromaticity:0,07368
hydropathy:-0,15197

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC028P
[NCBI] 		2796519 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53414.1 [NCBI]
Genbank nucleotide accession
MW273921.1 [NCBI]
CDS location
range 15646 -> 17928
strand -
CDS
TTGACTATATCAACTACAACAATAAAAAACAGTTATTCAGGAAATAACTCTACATCAGCATTTAACTATACATTTAAAATAGCTGCTGCTAGTGAAATGCAAGTTATCATCAGGTCCTCATCAGGAACTGAAACTGTAAAAACTTTAACGACACATTACACAATTAGTGGCATAAATAATTCTGGAGGTGGAGCTGTAACTTTCACATCTGGAAATATTCCAGCTTCTGGAGAGACTGTTGTTTTAAGAAGAGTTACTGCACAAACTCAAGCAATGGATCTGATCGATAACGATCCAATGAGTGCTGATACTATTGAAACAGCTCATGATAAATCTATTGCTATTGCTCAAGAACTCCAAGAACAAATTGATAGATCTTTAAAACTATCAAGAACAAACACAATGACATCGACTGAATTTACAATCGATGCCACAAACAGAGCTGGAAAAGTTTTAGGATTTGATACTACTGGAGAGTTGGCTGTAACTTCTGAAATTGGAACTAACAGAGGAAACTGGTCTGCCTCAACTTCTTATGCCATTAGAGATATTGTTAAAGATACTTCTACCAATAATATTTTCATGGCGAACACAGTTCATACTTCGTCTGGATCACAACCATTAACTACAAATACTGATAGTGCAAAATGGGATCTATTGGTTGATGCTGCATCGGCAACTACATCAGCTACTAATGCTGCTACCTCAGCAACAGCTGCTGGAAATTCTGCGACTGCTGCTGCAAACTCAGCTACTGCTGCTGCTTCATCAGAAACTGCTGCTGCCTCTTCTGCATCCACAGCCTCTACTCAGGCAACTAACGCAGCAAATTCTGCTACTGCTGCTGCCTCAAGTGCAACTGCTGCTGCTGGATCTGCTTCAGCTGCTGCTGCTACTTTCGATTTATTTGATGATGCTTATCTTGGTGCAAAATCTTCCAATCCATCTGTTGATAATGATGGAGATGCTTTGGCTGATGGAGCATTATACTTTGATACGACTAACGATGTAATGAAGGTCTATGATCTTGGAACAACAACTTGGTTACAATTAACACCAACTGTTTCAAATCAAAATAATATAAATGCTGTTAATTCAAATTCTGCGAATATTAATACAGTAGCCTCTGATCTTTCTGGATCAAACAATATAGGTGCTGTGGCTGGAAATGCGACCAATGTAAATCTTGTTGGTGGATCAATAGCGAATGTTAATAATTGTGGAAACAATATTGCTTCAATAAACACAGCTGCAACTAACCTGGCTGATATTAATGCCTTTGCAAATATTTATCTTGGACCAAGTTCATCAGCTCCTACTCAAGATCCTGATGGATCTGCATTAGATGTTGGAGATCTATATTTTGATACTTCTAGCGATACTTTAAAAGTTTATAAATCTGGTGGCTGGGCTGCTGCTGGATCGACTGTTAATGGAACTAGCAAAAGATTTAAATACACAGCTTCTGGTGGACAAACTACTTTTACTGGATCAGATGATAACTCTGAAACTCTTGCTTATGATGCTGGATTTATAGATGTTTATTTAAATGGTGTTCGACTTGTAAATGGAGTTGACTGCACAGTAACAAATGGAACATCGATTGTTCTTGCAAGTGGAGCTTCTGCATCAGATGTTTTAGAAGCAGTTGCTTTTGGAACTTTTGAATTAGCAAATATTCAAGCAAATGATTTAACAGATGTAAATACTTCTGGTGTAGCTGATGGACAAGTATTAGTTTATAGTTCAGCCAATTCAAGATTTCAGCCTGGCAATGCTAGTTCAGCAGAAGTCTATGGTTTTAATTTATCATTTGTTGCATCAACAGTTAATTATACAGTTGATGTTCAATCGCATGGTGGATCAAATAAATATTTTATTCTTGGCTATCCACAAAGAACTTTAGAATTAGAAGAAGGTAACACTTATGTTTTCAGCTATCCTTCAGCTCATCCATTTGCTTTGTCAACAACATCGAATGGATCGCATGGAGGAGGATCTGAATATACGACTGGAGTTACAAGAGATAGCTCAGCAAACACATTAACTTATGTTGTTCCAACTGGAGCTCCTACTCTCTACTACTACTGCACATCGCATAGTAACATGGGAGGTCAAGCAAACACACCAGCTCCATTAGATAACAATTTACAATTAACAACGACCAATCAAGGTCAAGATAACATCAGCAATGCTCAATATGCTGCCTTTGATGATGTTCTATTTAGTGCAAGTGGATTTAGTTTTTCACTTTCAAATGGCAGCTTAATCGCAACCATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a03e6f827fff20e8fe8bac11148eb33919bcba3d603e1a7b8759951ba23ad44
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank