Protein

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Genbank accession
YP_009801161.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALAPKTVLTYPLDGANRDFTIPFEYLARKFVQVTLVGKDRTILTLNIDYRFTQRTIITTTKPWGPADGYERIEIRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDVASDTIGVNNDGDLDARGRKIVNLADAVSDGDAVTLRQEKAWSNSALSQANRSEQMASAAHGSRIAADDAARRANGSAVASYRDAERAKRWAEEVSGVEIEPGQWSSKAWALTSGQYAGQSQAAQAASQTSAERSNTSAVASYQDANRSTAAADRSAAAAGQALAQANRAEAEANKLGNANAFMETIWSVEPSKKVIFKGPQHIVANLFVQQYGTELADSKYGYMGYYGGGLMVLGNSQGGDLIKITVDGTMSAKGGFESGGVLKTTSGIVTSVAAGTSHFVLQGTNGVNRGMVFSGDDRIVRLGAADGAVHFAVHPNGRSVLPGPVDFKGSSSYIPTDCNLVSSIFHGGNLREHLARLELASTVYRDERVVLWQGTPWGIGATIVLNSDVRNFQSFASHWNSVLTGTVCTLTGLRELTTFPFGTVMYMGTDNGVYYQVKFNDLGDGTYRSITMVGAGTGATALPVIYGFRRKV
Physico‐chemical
properties
protein length:589 AA
molecular weight: 63125,65370 Da
isoelectric point:6,77841
aromaticity:0,08489
hydropathy:-0,23684

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604
DC_0657
STR
1–585
DC_0657
YP_009801161.1
1 589
Architecture
ATT
STR
ATT 1-131 | STR 132-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 22PfluR64PP
[NCBI] 		2163970 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pfluvirus
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009801161.1 [NCBI]
Genbank nucleotide accession
NC_047965.1 [NCBI]
CDS location
range 3545 -> 5314
strand -
CDS
ATGGCACTCGCCCCAAAGACTGTCTTGACGTATCCGCTTGACGGTGCGAATCGAGACTTCACGATCCCCTTTGAGTACCTTGCGCGGAAGTTCGTGCAGGTCACGCTCGTCGGTAAGGATCGGACCATCTTGACCCTCAACATCGACTATCGGTTCACTCAACGGACCATCATCACGACTACCAAACCATGGGGTCCTGCTGATGGCTACGAGCGTATCGAGATTCGACGCTACACCTCAGCGACAGAACGTCTGGTAGACTTCAGTGACGGTTCGATCCTTCGAGCCTACGACCTGAACACCTCTCAGGTTCAATCGCTCCACATCGCCGAGGAAGGCCGTGACGTTGCATCCGATACCATCGGCGTGAACAATGACGGTGACCTTGATGCTCGTGGCCGCAAGATCGTGAACTTGGCTGATGCTGTGTCCGATGGTGACGCTGTGACCCTCCGTCAGGAGAAGGCATGGAGTAACTCGGCACTGAGCCAAGCCAATCGCTCTGAGCAGATGGCGAGCGCTGCACATGGCTCCCGTATTGCCGCTGATGATGCTGCTCGGCGAGCTAACGGATCTGCTGTGGCCTCGTATCGGGATGCTGAGCGAGCCAAGCGATGGGCCGAGGAAGTATCCGGCGTGGAGATTGAGCCGGGTCAGTGGTCTTCCAAGGCGTGGGCTCTCACCTCTGGACAGTACGCTGGTCAGTCACAGGCTGCACAGGCTGCTTCACAGACATCGGCTGAGCGGTCAAATACATCGGCTGTAGCTTCGTATCAGGACGCCAACCGCTCCACTGCGGCTGCTGACCGCTCTGCTGCGGCTGCTGGACAGGCGCTTGCTCAGGCAAACCGGGCTGAGGCTGAAGCGAACAAGCTGGGCAACGCCAACGCCTTCATGGAAACCATTTGGTCTGTCGAGCCGAGTAAGAAGGTGATCTTCAAGGGTCCCCAACACATCGTTGCGAACCTCTTCGTGCAGCAGTATGGCACCGAGCTTGCTGACAGCAAGTATGGCTACATGGGCTACTACGGCGGTGGCCTTATGGTCTTAGGTAATAGCCAAGGCGGTGACCTGATAAAGATCACAGTGGACGGCACTATGTCCGCTAAAGGTGGTTTTGAATCTGGTGGTGTCCTTAAGACAACCAGCGGGATCGTCACTTCTGTGGCTGCGGGTACTTCCCACTTCGTCCTTCAGGGGACCAATGGTGTCAACCGTGGGATGGTCTTTTCGGGGGATGACCGGATTGTACGTCTGGGGGCCGCTGACGGTGCGGTCCACTTCGCGGTACATCCTAACGGGCGCTCCGTGCTTCCCGGTCCGGTGGACTTTAAGGGGTCCTCTTCGTACATCCCAACGGACTGTAACCTCGTGTCGTCCATCTTCCATGGCGGCAACCTCCGTGAACACCTTGCTCGACTCGAACTGGCCTCTACGGTCTACCGTGACGAGCGTGTTGTGCTGTGGCAGGGCACCCCGTGGGGCATCGGCGCGACCATTGTGCTGAACTCGGATGTTCGTAACTTCCAGTCGTTTGCGAGCCACTGGAATTCCGTACTGACCGGCACAGTGTGTACCCTAACAGGACTCCGTGAGCTGACCACGTTCCCTTTCGGGACGGTCATGTACATGGGCACTGACAACGGTGTGTACTATCAGGTCAAGTTCAACGACCTTGGCGACGGTACATACCGATCCATCACAATGGTTGGAGCCGGTACTGGTGCAACTGCCCTTCCAGTAATCTACGGCTTCCGCCGCAAAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b31e4005b40c877aa893bccd6651faf8bf3fdda44a791dba9521c79815df01a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture Stanczyk,M. 2011-09 — GenBank