Protein

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Genbank accession
QEM42376.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQNLNIGQVVDDGSGDYLRLGGQKINNNFDELYYQLGDGTYPHAAGAWKTHSAANSIRLDPKMGDSFAINTQAARVTVYLPKGKPSDYNSVIRLRDVWSTWRLSPVTVVPASGDTIKGSASPKTFNTNYQDLELVYCSPGRWEYINGKTIEKFTNGDLATVSKKSIIATEGQTDFLDIFDGEEYNPESLNVYRRGNMLFYGENGFDPVNADYGSPGPNNTIVALNKKDVRLVKPCSAGDVIIFETFLDGIGVWRSSYNKVTVMVRSNKLTSEKTVQGSKIVADLSTLRELSTADLGVLPGIDMNPNSIEVEINGKSQVEAGTGGLPEFICEGAPGESLQDCIANGGTWVQSDSDYRLIFDSDGIKVSGIRFGQPFEDQDIITVRWYNNNIGTTMSMDDIVSETDLIYMNAEETVDLKNRIEYTDYQNPSQKTKVDVPNEYDVRLSNISAFFDSIYPIGTIYENAHNHANPRDYMGMGVWKMYGEGYASVGWASDISNPYFALNNNDLDSSGRPSHSAGGTVGEVEFQISANNIPELKSDDTVLIADDNGTVVIGGCQLDPDAAGPGYSKYREGSITVNKGAGGLPISNVQPSITVYRWIRVA
Physico‐chemical
properties
protein length:603 AA
molecular weight: 66032,55530 Da
isoelectric point:4,62410
aromaticity:0,09453
hydropathy:-0,40348

Domains

Domains [InterPro]
IPR034695
Unmapped
1–603
IPR034695
IPR036240
STR
1–231
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–580
DC_2238
IPR008987
ATT
2–152
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–41
G3DSA:1.20.5.960
QEM42376.1
1 603
Architecture
ATT
STR
ATT
ATT 1-263 | STR 264-450 | ATT 451-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEM42376.1
1 603
Domain Start End Length (AA) Confidence
N-terminal 1 315 315 0,9197
Central domain 316 514 200 0,2131
C-terminal 515 603 88 0,9325
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-315
Central
316-514
C-terminal
515-603

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage EI
[NCBI] 		2601625 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEM42376.1 [NCBI]
Genbank nucleotide accession
MN106245 [NCBI]
CDS location
range 86257 -> 88068
strand +
CDS
ATGAAACAAAATTTAAATATTGGCCAAGTAGTCGACGACGGCAGCGGAGATTATCTCCGCCTTGGTGGCCAAAAGATTAATAACAACTTTGACGAACTGTACTATCAATTAGGCGATGGTACTTATCCTCACGCCGCTGGTGCTTGGAAAACCCACTCAGCAGCTAATTCTATTCGACTTGACCCTAAAATGGGTGATAGTTTCGCGATTAATACCCAGGCGGCTCGTGTAACAGTTTATCTTCCTAAAGGTAAACCTTCGGACTACAACAGTGTTATTCGTCTACGTGATGTATGGTCTACCTGGCGGTTGTCCCCTGTGACTGTGGTTCCTGCCTCAGGCGATACTATTAAAGGTTCTGCATCTCCTAAGACCTTTAATACTAACTATCAAGATCTTGAGCTAGTTTATTGCTCTCCAGGTAGATGGGAATACATCAACGGCAAAACCATTGAAAAATTCACTAACGGCGATTTAGCTACAGTTTCTAAGAAATCAATTATTGCCACTGAAGGCCAAACTGACTTCTTAGACATTTTTGATGGCGAAGAATATAATCCAGAATCTCTGAACGTCTATCGCCGTGGTAATATGTTGTTTTACGGTGAGAATGGATTTGACCCGGTTAATGCTGATTACGGTTCTCCTGGCCCAAACAATACTATTGTGGCTTTGAATAAAAAAGATGTTCGGTTAGTTAAGCCTTGTTCTGCAGGCGATGTAATTATTTTCGAAACCTTTTTAGATGGTATTGGTGTATGGCGTAGCTCATATAACAAAGTTACTGTTATGGTTCGCAGTAACAAACTTACCTCCGAGAAAACAGTCCAAGGCTCTAAAATTGTAGCCGACCTGAGTACCCTGCGTGAACTTAGCACCGCAGATTTAGGTGTTCTTCCTGGTATAGACATGAACCCAAATTCTATCGAGGTAGAAATAAACGGTAAAAGCCAGGTTGAAGCTGGGACAGGCGGTCTTCCGGAGTTTATTTGTGAAGGCGCCCCTGGTGAATCTTTACAAGATTGTATAGCTAACGGCGGGACTTGGGTCCAATCGGACTCCGATTATCGTTTGATATTTGATAGTGACGGGATTAAAGTTTCTGGTATCAGATTCGGTCAACCGTTTGAAGACCAGGATATCATTACTGTCCGTTGGTACAATAACAACATCGGGACTACGATGTCCATGGATGATATTGTTTCTGAGACAGATCTGATTTATATGAATGCCGAAGAAACAGTAGACCTTAAAAACAGAATCGAATACACTGATTATCAGAACCCGAGCCAAAAAACTAAAGTTGACGTGCCTAATGAGTACGATGTTCGGTTATCTAACATCTCAGCATTTTTTGATTCGATTTATCCTATAGGAACAATTTATGAAAATGCTCATAACCATGCTAATCCTCGAGATTACATGGGTATGGGTGTGTGGAAGATGTACGGTGAAGGCTATGCATCTGTAGGGTGGGCTTCTGATATAAGTAATCCTTACTTTGCATTAAATAATAATGACCTAGACAGTTCAGGTAGGCCGTCTCATAGCGCTGGAGGCACGGTCGGCGAAGTTGAATTCCAGATTTCAGCAAATAACATCCCCGAACTTAAATCTGATGATACGGTTCTTATTGCTGATGATAATGGTACCGTAGTTATCGGCGGGTGCCAATTAGACCCAGATGCAGCTGGTCCTGGGTATTCCAAATATAGAGAAGGTTCTATCACCGTAAACAAAGGCGCCGGTGGCTTACCTATTTCTAACGTTCAACCTTCTATAACTGTCTATCGCTGGATAAGGGTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ef89bc32e0555cb4bffb61742bbd367dc94f1224d5f0108567e29035239109c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6421
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Klebsiella pneumoniae Myophage EI Michalik,J., Lessor,L., Liu,M. and Gill,J. 2019-09-26 — GenBank