Protein

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Genbank accession
YP_011108788.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQSIKNLKGGISQQPEILRYPEQGTLQVNGWSSETEGLQKRPPMVFIKSLGDRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYISVVNPKDNLRMVTVADYTFIVNRTRQVRENQNVTNGGTFRDNVDGIVNVRGGQYGRKLEVNINGVWVSHQLPPGDNAKDDPPKVDAQAIAAALADLLRVAHPTWTFNVGTGYIHCIAPAGVTLDEFQTRDGYADQLINPVTHYVQSFSKLPLNAPDGYTVKIVGDTSKTADQYYVKYDASQKVWKETVGWNISVGLEYHTMPWTLVRAADGNFDLGYHEWRDRRAGDDDTNPQPSFVNSTITDVFFFRNRLGFISGENIVLSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYLLMRNAYNVWIAAVDFKKESTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFSKGTVAICESDGKITEYEPTGSSWDSTPDIRISGDISGKDIVIGFLYDFQYVFSRFLIKQEQNDGTTSTEDSGRLQLRRAWVNYQDTGAFTVSVENGNREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYMRRANGI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 88891,95890 Da
isoelectric point:5,36653
aromaticity:0,12389
hydropathy:-0,39545

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
YP_011108788.1
1 791
Architecture
TTP
TTP 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011108788.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 590 590 0,9247
Central domain 591 780 191 0,2742
C-terminal 781 791 10 0,9567
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-590
Central
591-780
C-terminal
781-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Saitama
[NCBI] 		3018528 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella quasipneumoniae
[NCBI] 		1463165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011108788.1 [NCBI]
Genbank nucleotide accession
NC_092456 [NCBI]
CDS location
range 23031 -> 25406
strand +
CDS
ATGGCTCTCGTATCACAATCAATCAAAAATCTCAAGGGAGGCATTAGCCAGCAGCCTGAAATCCTAAGGTACCCAGAGCAGGGTACGCTTCAGGTCAACGGTTGGTCCTCCGAGACTGAGGGTCTCCAGAAGCGACCACCAATGGTGTTCATCAAGTCCTTAGGCGACCGTGGGTACCTTGGGGAAGACCCGTACATCCACCTCATCAACCGCGACGAATACGAGCAGTATTACGCTGTGTTCACAGGGAATGACGTTCGGGTATTCGACCTGTCGGGCTATGAGTATCAGGTCAGAGGTGACCGCTCATACATCTCCGTAGTCAACCCTAAGGATAACTTGCGGATGGTCACCGTGGCCGACTACACGTTCATCGTGAACCGCACCAGACAGGTCCGGGAGAACCAGAACGTTACCAACGGTGGTACCTTCAGGGACAACGTGGATGGGATTGTTAACGTCCGTGGCGGTCAGTATGGGCGCAAGCTCGAAGTGAACATTAACGGTGTGTGGGTCAGTCACCAGCTCCCTCCGGGTGACAACGCTAAAGACGACCCACCTAAGGTCGACGCACAGGCCATTGCGGCAGCACTCGCTGACCTACTCCGTGTGGCACACCCAACGTGGACTTTCAACGTGGGGACTGGTTATATCCACTGTATTGCGCCTGCTGGGGTAACTCTCGATGAGTTCCAGACGAGGGACGGTTACGCTGACCAGCTGATTAACCCGGTGACCCACTACGTTCAGAGCTTCTCTAAGTTGCCGCTGAATGCTCCAGACGGGTACACGGTGAAGATTGTCGGAGACACGTCCAAGACTGCCGACCAGTATTACGTGAAGTATGACGCTTCGCAGAAGGTCTGGAAGGAAACCGTGGGCTGGAACATCTCGGTCGGCCTTGAGTATCACACGATGCCTTGGACGCTGGTGCGTGCGGCTGACGGTAACTTTGACCTCGGGTATCACGAGTGGAGGGACCGCCGTGCTGGTGATGACGACACTAACCCTCAGCCGTCCTTTGTTAACTCAACGATAACCGATGTGTTTTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGCTATCCCGCACCAGTAAATACTTTGAGTTCTACCCGCCGTCAGTGGCCAACTACACAGACGATGACCCGCTAGATGTTGCCGTGAGTCATAACCGTGTGTCGGTCCTTAAGTACGCTGTGAGCTTCGCTGAGGAGCTTCTACTGTGGTCTGATGAGGCACAGTTCGTTCTGTCAGCCAACGGTGTGTTATCCGCTAAGACTGCGCAGCTGGACCTGACCACTCAGTTCGATGTGTCAGACCGTGCTCGTCCTTATGGTATCGGCAGGAACATCTACTATGCGTCTCCTCGCAGCTCCTTTACGTCCATCATGCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCCCACGTCCCGAACTACATCCCGAACGGTGTGTACAGCATCAACGGGTCTGGTACGGAGAACTTCGCGTGTGTGTTGACCAAGGGAGCTCCAAGTAAGGTGTTCATCTACAAGTTCCTCTACATGGACGAGAACATCCGGCAGCAGTCGTGGTCCCACTGGGACTTCGGGGACGGTGTGGAGGTGATGGCCGCAAACTGCATCAACTCAACGATGTACCTACTGATGCGTAACGCCTACAACGTGTGGATAGCTGCGGTGGACTTTAAGAAGGAGTCGACTGACTTCCCATTTGAGCCTTATCGATTCCACGTGGACGCCAAGCGGTCATACCACATCTCAGAGACTGCGTATGACATCGAGACCAACCAGACGGTAGTTAACGTCAAGGACATCTACGGTGCGTCGTTCTCTAAGGGAACCGTGGCAATCTGCGAGAGTGACGGTAAAATCACCGAGTACGAGCCTACGGGTTCCTCTTGGGACTCAACCCCGGACATCCGCATTAGCGGTGACATCTCAGGTAAGGACATTGTAATCGGGTTCCTGTACGACTTCCAGTATGTGTTCAGTCGGTTCCTCATCAAGCAGGAGCAGAACGACGGCACAACGTCCACTGAGGACTCTGGTCGCCTACAGCTGCGCAGAGCGTGGGTGAACTATCAGGACACTGGCGCGTTCACTGTGAGCGTCGAGAATGGCAACCGTGAGTTCAACTATCTGGTAAACGCCAGAGTAGGCTCTACTGGTCTTCGTCTGGGCCAGAAGGCCACAACGACAGGTCAGTACCGATTCCCGGTGACTGGCAACGCCTTGTACCAGAAGGTGTCCCTGAGTTCCTTCAACGCTTCCCCAGTGTCAATCATTGGGTGCGGCTGGGAGGGTAACTACATGAGACGCGCTAACGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ffa07da2af11591ba19789b12e8fa8e3f8572e6948e306cb873a7b5c87bfb4d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2910
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses Elek,C.K.A. and Adriaenssens,E.M. — — GenBank