Protein

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Genbank accession
QGF20174.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNILRSFTETVVTTPTELFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPDGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAANAATSAASQTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTIANNTSDPNIDMTGWVKVNSVSQIFDETYNITQSVINGNLVTVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTAFINCGPTIQNLTARCSNGAGKQISFIEIDGYLANISYVTIVNFYNQIVVKEALVGFNINNAWLYYSQNAGIYCEDPNNRVSTTGTFHNIYFQLGDGYAMIFDRDIHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKAWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLSTNNYGGVLVSAEGISIVNAGNKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADGSGAQYLASDTYTKLSRKWGTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWKIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGIGTGATHGIQMIETYAGSWTSYTEAAGFKVFWRDAAGTLVDPHRFTVAFTATS
Physico‐chemical
properties
protein length:699 AA
molecular weight: 76073,26990 Da
isoelectric point:5,22205
aromaticity:0,10587
hydropathy:-0,16781

Domains

Domains [InterPro]
DC_0704
ATT
40–275
DC_0704 DC_0160
Coil
Unmapped
122–149
Coil IPR012334
IPR011050
STR
221–557
IPR011050
IPR024535
ENZ
225–432
IPR024535
QGF20174.1
1 699
Architecture
ATT
STR
ATT 40-275 | STR 276-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGF20174.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9947
Central domain 241 526 287 0,9881
C-terminal 527 699 172 0,9770
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-526
C-terminal
527-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_PMK34
[NCBI] 		2653640 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGF20174.1 [NCBI]
Genbank nucleotide accession
MN433707.1 [NCBI]
CDS location
range 35605 -> 37704
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGAACTTTTCCCTATCAGTTTTGAATATGATGAGAAATACGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAAGACTTGGGGTACACTGTATCTCAAGTTAATGCTGTTACTCTAAAAATTGAACCTGCTATTCCAGATGGTACGGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTGTTCATTGATCAGAATGTTGATGCAGATTTTAGACAGATCGTACACTCGCAGCAAGAGGTACGTGACGGTTTTATTAAACTACGTGGTGATGTACTACCATTAGTGCATGGTTTACAAGAAGCTTTGCAACAAGCACAAGAAGCTAGTGAAGCTGCTCAAGAGGCTGCTAATGCAGCTACTTCTGCTGCTTCACAAACACAGTACTACTTAAAGTACTTCAACCCTGAAATAGTGTACCCTAAAAATGCGCGCATTATGCTTGATAATGGCGATATTGTTCGCTCTACCATTGCGAATAATACATCCGATCCGAATATTGATATGACTGGATGGGTAAAGGTTAATTCTGTTAGTCAGATTTTTGATGAAACTTACAATATCACCCAATCAGTAATTAATGGAAATCTAGTTACTGTTGATAATTTTGGCGCAAAGGGTGATGGGGTTACAGATGATAGCGCAGCTTTTCAAGCATATTGTGATAGTGCTTTAACTGGACAAAATCTATATCTTGGGGCAAAAGGTCGCTACATCATCAAGAATCAAGTAGACCTAAAAGGTAAAGGTTTGGTTGGCAACGGGTGCGGAAAGGTTAGTGAGTTCTACTACAACTTAGGTTGTATTGATGTTGATGGCTCCAGCCCTGATCTTCAAGGTAAAACGGCATTCATTAATTGTGGTCCTACAATCCAAAATCTTACTGCAAGATGCTCTAATGGAGCAGGGAAACAGATCTCATTTATTGAAATAGACGGCTATCTAGCCAATATTTCTTATGTCACAATTGTAAACTTTTACAATCAAATCGTAGTAAAAGAGGCGCTAGTAGGCTTTAACATCAATAATGCTTGGCTCTACTACTCTCAAAACGCTGGTATCTACTGCGAAGACCCTAATAACCGTGTAAGTACAACTGGAACATTTCACAACATTTATTTCCAGTTGGGTGATGGTTATGCAATGATTTTTGATAGAGATATTCATGGGTGTGATTTCGATAATATTATATTCGAATCTATGAATGGAGGTATCAAGGCTCGAACAGTAGCACATTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCTACATCTAAAGCTTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGGAATAGCTTTACTGGCTACGTTAAATTATTAGGCGGGTGGACGTCGAAAACATCACCAACGCTAGACTCTTTGTCAACAAATAACTATGGTGGTGTATTGGTTAGTGCAGAGGGTATCTCTATTGTTAATGCTGGCAATAAAGCAAAAATGCTTATGCTGCCAAGTGGTTTTAAGACTGGCAACGCAACGATTGATGAAACGCACATTAGCTCATCTACCGTAACACCCTTAGTTAAGAGACGTGTTATTGGCGCAGATGGCTCTGGAGCACAATACCTTGCATCCGACACCTATACAAAGCTTTCTCGCAAGTGGGGAACATATAACCACGGATCAAATAATGCTGGGGCGTTTTATGCACCAATGATGCTTACTTATGATCAGTCATTTAGCACACCACAAAACAATAATGGTTGGAAAATCGTTAAAGAATCTACTGGCGTTTATCGGGTTGAACGTGTTTCTGGGAATACTTCGGTAATCACAAATGGGCATATTGTTGTTGGCTCACCACTAATGGGTTCTCGTCTGGGTATTGGAACAGGTGCTACGCATGGAATTCAAATGATTGAGACCTATGCAGGTTCGTGGACTTCTTACACAGAAGCTGCTGGTTTTAAAGTGTTTTGGCGTGACGCAGCGGGGACGCTGGTTGACCCGCATAGGTTTACAGTTGCATTTACAGCAACGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6d629c5ba653f872f5f0126916343a1d318114aa9248d86c2e50b580499e98c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6947
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a virulent bacteriophage PMK34 infecting the extensively-drug resistant Acinetobacter baumannii and its lysin Abdelkader,K., Safaan,A., Gaber,Y., Khairalla,A., Dishisha,T., Gutierrez,D. and Briers,Y. 2020-09-17 — GenBank