Protein

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Genbank accession
WDS61786.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGILTVGDGGERVQIHPGNNASIKFYGGNAIRADIFGMTSGANAIQIRPGSNSTNDFNFGMDGTLSSLALVARTRFDVHATADTEWSAVNFRGAVNSSQKRGLVFADANGAVGFNNAKGSQATWTNDNGFIIGSGSLTVGNYAANGEQQEPGAKSYFRNKDWMYLEGTNAWQDPSLGWVRQVNGLRMDMKRPGAAWYTEDCTLQSDGWGQVRRRFVVYADGAQGIFEMTHVGDLLVQRNVEANNVLIRSDRTVKSNIKTISSALDKISNLDGSTYIDESNKLSAGLIAQDVQEVLPEAVIRDDKGLLRLNYNAVVGLLVNAVKELRQEVKELRGE
Physico‐chemical
properties
protein length:335 AA
molecular weight: 36405,17640 Da
isoelectric point:5,76588
aromaticity:0,08060
hydropathy:-0,34657

Domains

Domains [InterPro]
DC_1202
STR
3–335
DC_1202
IPR030392
CHP
249–335
IPR030392
IPR030392
CHP
249–299
IPR030392 Coil
WDS61786.1
1 335
Architecture
STR
STR 3-335
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61786.1
1 335
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0024
Central domain 11 209 200 0,1796
C-terminal 210 335 125 0,9857
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-335

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_Cdu_VP8
[NCBI] 		3020854 No lineage information
Host Cronobacter dublinensis
[NCBI] 		413497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61786.1 [NCBI]
Genbank nucleotide accession
OQ361773.1 [NCBI]
CDS location
range 155279 -> 156286
strand +
CDS
ATGGGAATCCTTACCGTTGGTGATGGCGGGGAGCGAGTTCAAATACATCCAGGAAATAACGCTTCTATTAAATTTTATGGCGGCAATGCTATAAGAGCTGACATTTTCGGAATGACTTCTGGCGCAAATGCTATACAAATTCGTCCAGGCAGTAATTCTACGAATGACTTCAATTTCGGCATGGATGGAACACTTTCTTCTTTGGCTTTAGTAGCACGAACTCGATTCGATGTCCATGCTACAGCTGATACAGAATGGTCAGCCGTCAACTTCAGAGGAGCTGTTAACTCGTCTCAGAAACGAGGGTTAGTTTTCGCCGACGCTAATGGCGCAGTAGGTTTCAACAACGCTAAAGGTTCTCAAGCTACATGGACAAATGACAATGGCTTTATTATAGGTTCTGGATCATTGACCGTAGGTAACTATGCTGCAAATGGTGAACAGCAAGAACCTGGAGCTAAATCTTATTTCAGAAATAAAGATTGGATGTATCTAGAAGGAACCAATGCTTGGCAAGATCCTAGTTTAGGATGGGTGCGTCAAGTCAACGGTTTAAGAATGGACATGAAGCGGCCAGGAGCAGCTTGGTATACCGAAGATTGCACTTTACAATCTGATGGTTGGGGTCAAGTGCGACGCCGGTTTGTTGTGTATGCCGATGGAGCTCAAGGAATTTTCGAGATGACTCATGTCGGTGATCTTCTCGTACAGCGAAATGTCGAAGCTAACAACGTCCTTATTCGTTCAGACCGAACTGTTAAATCTAACATCAAGACTATATCATCGGCTCTAGATAAAATTTCAAACTTAGACGGTTCAACATATATCGATGAGTCAAATAAGCTTTCTGCAGGTCTTATTGCTCAAGATGTTCAAGAAGTTTTGCCTGAGGCAGTAATCAGAGATGACAAAGGTTTATTGCGTTTGAACTACAACGCAGTTGTTGGATTGTTAGTTAACGCTGTTAAAGAACTTCGCCAAGAAGTCAAAGAATTAAGAGGTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0fd5f4eac39e6a5a56894b774914dc2beb7c5aa287ccdd2fe2b584839355177
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6979
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50