Protein

View in Explore
Genbank accession
UYE98981.1 [GenBank]
Protein name
regulator regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,51
Protein sequence
MLPFPIISNTNIVPVASIKKMVIGGSNLTILGSDGTLTGYGTNPSGNLGTGSTSTSLGWYDSTLTDVRDVFMNGSDSSIAIKNDGTIWFCGVLRSATLGSPSLGTSPISTYTNISDRIPVSGNIVIDVKFSYNYVAFLCSDGNIYTTVPSSIMTGTTITSTGYTGWRINTPSTPLVKIFSYPLSTGYNDVWMGLDSTGHAFGIGYDGWKQISNTGSGTYTTWTPTISSKTFTDIQFGSNFCIFKSTDNIMYYSGISGVVNTANINNTINAYAVFNGSGSSSNNLLYILAGTSIAMHIRRSGAMYGWSANNMMPLDTSNTGNQSPHLLRNVPDVVNIDSLKFCEASSRSMYALYDTGAGTRKLWIIGTAFGGTGSNTTFQEVVLPAKYT
Physico‐chemical
properties
protein length:388 AA
molecular weight: 41344,92040 Da
isoelectric point:6,80320
aromaticity:0,10825
hydropathy:0,00541

Domains

Domains [InterPro]
DC_0433
ATT
1–137
DC_0433
IPR009091
STR
5–254
IPR009091
IPR009091
STR
15–324
IPR009091
UYE98981.1
1 388
Architecture
ATT
STR
ATT 1-137 | STR 138-324 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98981.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,8368
Central domain 14 229 217 0,6732
C-terminal 230 388 158 0,5366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-229
C-terminal
230-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98981.1 [NCBI]
Genbank nucleotide accession
OP292654 [NCBI]
CDS location
range 361255 -> 362421
strand -
CDS
ATGTTACCTTTTCCGATTATAAGTAATACGAATATTGTTCCAGTTGCTTCAATAAAGAAAATGGTTATTGGTGGTAGTAATTTAACAATATTGGGTTCAGATGGAACATTGACTGGTTATGGCACAAATCCGTCTGGAAATTTAGGAACAGGAAGTACAAGTACATCATTAGGATGGTATGATTCTACATTAACTGATGTTCGTGATGTATTCATGAATGGTTCAGATAGTAGTATAGCTATAAAGAATGATGGTACTATTTGGTTTTGTGGCGTATTAAGATCTGCTACTTTGGGTTCACCATCACTAGGAACATCACCAATAAGTACTTACACTAATATAAGTGATAGGATACCTGTATCTGGTAATATTGTAATTGATGTTAAATTCTCATATAATTATGTAGCATTTTTATGTTCAGATGGCAATATCTATACTACTGTTCCATCGAGTATAATGACTGGAACAACAATAACAAGTACTGGATATACTGGTTGGAGAATTAATACTCCTAGTACTCCATTGGTAAAGATTTTTTCATATCCTTTATCTACTGGATATAATGATGTTTGGATGGGTTTAGATAGTACCGGACATGCTTTTGGTATTGGTTATGATGGATGGAAACAAATATCAAATACTGGTTCTGGAACATATACTACATGGACTCCAACAATATCAAGTAAAACATTTACGGATATTCAATTCGGGTCAAACTTTTGTATATTCAAAAGTACTGATAATATTATGTATTATAGTGGTATTAGTGGAGTTGTTAATACTGCTAACATTAATAACACAATAAATGCTTATGCAGTGTTTAATGGTTCAGGAAGTTCATCTAACAATTTACTTTATATACTAGCCGGAACATCAATAGCTATGCACATAAGAAGAAGTGGGGCTATGTATGGATGGTCAGCAAATAATATGATGCCATTGGATACTAGTAATACAGGAAATCAGTCTCCACATTTATTGAGAAATGTGCCTGATGTTGTTAATATAGATTCATTAAAATTCTGTGAAGCTTCATCTAGATCAATGTATGCGTTATATGATACTGGTGCTGGAACAAGAAAACTTTGGATAATTGGTACAGCATTTGGCGGTACTGGTTCAAATACAACATTTCAAGAAGTAGTTTTACCAGCGAAATACACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04fa6542193d2cb65a645993c55db5051d46707b98a35cedbe9b9833bc86142b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank