Protein

View in Explore
Genbank accession
BBI55067.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSSRADMIGSGPSSGHYQAGPTPTEEKSMPTYINDELLALGGIVNGILEGGAFPPQGKMPVRWREGMMMYFTEPLDDVYNVGQYRGQKIITSAGVWLYRRKRWWKIIDDPSSITGAVFAYRLTADGTPPSTPSPSSAPPSGWSDVAPTKSDKSEWIWVTMSAAYDENTDTHTWSQPTPFSAGVVDGEDGQDGADGQDGAPGLDGRIFEQWFREASVTPSVPSDVYPAPSPWSKTPPENPTLPVWMTFIKVREDGTDPIYPWSFPIKISGKDGQDGIDGKITKQFFKEAATQPQVPSNTYPPTGWSETTPNNPTLPVWMTWILVQEDGNLPQYPYSFPIKVTGKDGEQGEVGPIGPEGPPGQDGQDGQDGEDGTRGTLNVSKAISGSSWNNSQAYNAIVNDPNSDGVVRYWDTVTLFNSVNQFSEQRYYTGGTGSSSTWQPVELFVDGDAIINGTIAANKLVANTITAAQIATNAITANKIQAGAVTASKIATNAITANKIAAGTITGNKINSGTRITIGGTSGQDVVVLDASDSNSRIWVGNTTSTSANFRVTPTGDLYANNGYFGGEVTYQGITGAIGGAVDSSATSSTPDWSEWYVSNGSDTPTATMARITVPRQNYDRVAIVTCIPSMLTATSRTNVDRFGIVWTSANSTGSTLSYNYRVSCVSESGSGYTTTGNTGAAFEFVARNSNQAWFKLTNTLAWEVFLPATTSTGNLTIDLKAKFLHATGQSYPVSGFVTFKVKDSTVRVDVSKVNSGISIQN
Physico‐chemical
properties
protein length:762 AA
molecular weight: 81529,03770 Da
isoelectric point:4,73471
aromaticity:0,09711
hydropathy:-0,39357

Domains

Domains [InterPro]
DC_0392
STR
1–201
DC_0392 DC_2138
DC_0392
STR
185–279
DC_0392 G3DSA:1.20.5.320
IPR057549
STR
363–476
IPR057549
BBI55067.1
1 762
Architecture
STR
STR
STR 1-279 | STR 323-756 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KIT05
[NCBI] 		2508208 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI55067.1 [NCBI]
Genbank nucleotide accession
AP019417.1 [NCBI]
CDS location
range 16125 -> 18413
strand +
CDS
ATGTCAAGTAGAGCAGATATGATTGGTTCAGGTCCAAGCTCAGGTCACTACCAAGCTGGACCGACACCTACAGAAGAGAAGTCAATGCCAACATATATCAATGATGAACTCTTGGCGTTAGGTGGTATTGTTAACGGTATCTTGGAGGGTGGGGCATTCCCACCTCAAGGTAAGATGCCAGTACGTTGGCGTGAAGGTATGATGATGTACTTCACAGAGCCTCTAGACGACGTTTATAATGTAGGTCAATACAGAGGTCAGAAGATTATCACTTCAGCCGGTGTGTGGCTTTACAGACGTAAGAGATGGTGGAAAATCATTGATGACCCATCAAGTATTACAGGTGCAGTATTTGCTTACCGTCTTACTGCTGATGGTACACCTCCATCAACTCCATCACCATCATCTGCTCCACCAAGTGGTTGGTCGGATGTAGCTCCTACTAAGAGTGATAAGTCTGAATGGATTTGGGTTACTATGTCAGCAGCTTATGATGAGAACACAGATACTCATACATGGTCTCAACCTACTCCATTTAGTGCAGGTGTTGTTGATGGTGAAGATGGACAAGATGGTGCAGACGGACAGGATGGTGCTCCGGGCTTAGATGGTCGTATCTTTGAGCAGTGGTTTAGAGAAGCTTCTGTAACTCCATCAGTACCTAGCGACGTATATCCGGCTCCATCTCCTTGGTCTAAGACTCCGCCAGAGAATCCTACTCTGCCTGTGTGGATGACTTTTATCAAGGTTCGTGAGGATGGTACTGACCCTATATATCCTTGGTCTTTCCCTATTAAGATTTCAGGTAAAGATGGACAAGATGGTATTGATGGTAAGATTACTAAGCAGTTCTTTAAAGAGGCTGCCACACAACCACAAGTTCCAAGTAATACTTACCCACCAACAGGCTGGTCAGAAACAACACCTAACAACCCAACACTACCAGTTTGGATGACATGGATTCTGGTACAAGAGGATGGTAACTTACCTCAGTATCCTTATTCATTCCCTATCAAAGTTACTGGTAAGGATGGTGAGCAAGGTGAGGTCGGTCCTATCGGTCCTGAAGGTCCACCGGGTCAAGATGGTCAGGACGGTCAAGATGGAGAAGATGGTACCCGTGGTACCCTTAACGTTTCTAAGGCTATCTCAGGAAGCTCATGGAATAATTCACAGGCATATAATGCTATTGTCAATGACCCTAACTCTGACGGTGTAGTTCGATACTGGGATACTGTTACATTGTTTAACTCTGTAAACCAATTCTCAGAACAACGTTATTACACAGGAGGTACTGGTTCATCGAGTACATGGCAACCTGTGGAACTATTCGTAGATGGTGATGCAATTATCAACGGTACAATCGCAGCTAATAAGCTGGTAGCTAATACTATCACTGCTGCGCAGATTGCTACTAATGCTATCACTGCTAACAAGATTCAAGCAGGTGCAGTAACCGCCAGTAAGATTGCTACTAATGCTATCACAGCCAATAAGATTGCAGCAGGTACTATCACAGGCAACAAGATTAACTCAGGGACACGAATCACTATTGGTGGTACATCAGGTCAAGATGTGGTCGTTCTAGACGCTAGCGACTCTAACAGCCGCATTTGGGTAGGTAATACAACATCAACCTCGGCTAACTTCCGAGTAACACCTACTGGTGACTTGTATGCTAACAATGGTTACTTTGGTGGTGAAGTTACATACCAAGGCATTACAGGTGCAATTGGTGGGGCTGTAGATAGCTCAGCTACGAGTTCTACACCTGACTGGTCTGAATGGTACGTTAGTAATGGTTCAGACACTCCTACGGCTACTATGGCTCGTATTACTGTGCCAAGACAGAACTATGACCGTGTGGCTATTGTTACTTGTATTCCGTCGATGCTTACTGCTACATCACGTACAAACGTAGATAGATTTGGTATTGTATGGACTTCTGCTAATAGTACAGGCTCTACACTATCATATAACTATCGTGTATCGTGTGTATCAGAATCAGGTTCTGGTTATACAACAACTGGTAACACAGGTGCTGCATTTGAATTTGTAGCTAGAAACTCTAACCAAGCTTGGTTTAAGCTGACTAATACATTGGCATGGGAGGTATTCTTACCAGCCACTACATCAACAGGTAACCTTACTATTGACCTTAAAGCTAAGTTCCTACATGCAACTGGTCAATCTTATCCTGTATCTGGCTTTGTAACCTTTAAAGTTAAGGACAGTACAGTGCGGGTAGATGTTAGTAAAGTTAACTCAGGTATCTCAATTCAGAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2368766bf6ac4fb03865be41dcd00169abfc4172b98b2bdfa7e977fcc8080b98
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus bacteriophage KIT05 Vo,T.T.A., Pham-Khanh,N.H. and Kamei,K. 2022-06-15 — GenBank