Protein

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Genbank accession
AGH26594.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAKQGILAKSKPSGATNTLLYSAPVDASASTVLTVNEQGGSGTTYDVALKNYDQKMTLGSSSYLLHEGDAITGYLMTLNTALPKTANLTGGTTITSVDAESTFKFESFYIPPFTEIVVKKRAVRAVTVESVSGNFAVGETFVTGSGGNTATATIFAVAQGSGSTIVSIGPTTLAGSGSEFAAGDSITASGGATGTIATGGIGTANNEFTFTESGGTEQMYLGVTLTVFTDRVYRFNVADSSMSGLVFKLSTTVNGEYGPDGDFTATTDNGTEYTTGKTTNGTAGSSGAYVQYDFSQDASLTGNLYVYEGTTSGNAGAGYGGSDRYLTTSDSFTYTQLYVYDITGTWTNSTDQFLFGGVTYTITAQTAGAYGYIRSYSGTTAYVVKGINSADFTTSSTFQDCPKLAGATRTAVTVSSIDVATTAVETQEYLRKDNTLAADSAEEIKSLVVGPGERLIVECAAAEANFVLIGFEDASTAFTTRTYAADAASSSASG
Physico‐chemical
properties
protein length:494 AA
molecular weight: 50916,11770 Da
isoelectric point:4,36537
aromaticity:0,10121
hydropathy:-0,05101

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM3
[NCBI] 		536446 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus ssm4
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH26594.1 [NCBI]
Genbank nucleotide accession
HQ634176.1 [NCBI]
CDS location
range 62658 -> 64142
strand -
CDS
ATGGCTAAACAAGGAATTTTAGCAAAATCAAAACCGTCTGGTGCTACGAATACTCTATTGTATTCAGCACCTGTTGATGCATCTGCAAGTACAGTTTTAACTGTAAATGAGCAAGGTGGATCAGGAACTACGTATGATGTTGCTCTTAAAAATTATGATCAAAAGATGACATTGGGTTCATCTAGTTATCTTTTACATGAAGGTGATGCAATCACAGGTTATTTGATGACATTGAACACTGCTCTACCTAAAACTGCAAACTTGACAGGTGGAACGACAATAACTTCTGTTGATGCAGAATCTACTTTTAAGTTTGAGTCATTTTATATTCCCCCATTTACTGAAATAGTTGTAAAGAAACGTGCAGTTCGTGCTGTCACTGTAGAGAGTGTTAGTGGTAATTTTGCTGTAGGTGAAACATTTGTCACAGGATCAGGTGGTAATACAGCAACTGCTACAATTTTTGCAGTAGCACAAGGATCAGGAAGTACAATCGTATCCATAGGTCCTACAACACTTGCAGGATCTGGATCTGAATTTGCTGCAGGTGATAGTATAACTGCATCTGGTGGTGCTACTGGTACAATAGCTACTGGTGGTATTGGTACTGCTAATAACGAATTTACATTCACAGAGTCTGGTGGTACTGAGCAAATGTATCTCGGTGTCACACTTACAGTTTTTACTGACAGAGTATATCGTTTTAACGTAGCAGACTCATCAATGAGTGGTTTGGTATTCAAACTATCAACAACTGTTAATGGTGAATATGGTCCTGATGGAGACTTCACCGCAACAACTGATAATGGTACAGAATATACTACAGGTAAGACAACTAATGGAACTGCAGGTTCTAGTGGTGCTTACGTTCAATATGATTTTTCACAAGATGCTAGTTTAACTGGTAATCTATATGTTTATGAGGGAACTACCTCAGGAAATGCAGGTGCAGGTTATGGTGGTTCAGATAGATATCTAACAACTTCTGATTCTTTTACATATACTCAATTATATGTTTATGATATCACAGGTACATGGACAAACTCTACCGATCAATTTTTATTCGGAGGTGTGACATATACCATTACTGCTCAAACTGCAGGTGCATATGGGTATATCCGTAGTTATTCGGGTACAACTGCATATGTGGTCAAGGGAATTAACTCTGCTGATTTTACAACGAGTTCTACTTTCCAAGATTGCCCTAAATTAGCAGGTGCAACAAGAACTGCAGTGACTGTAAGTAGCATTGACGTTGCCACAACTGCTGTAGAAACACAAGAGTATCTTCGTAAAGATAATACCCTTGCTGCAGATAGTGCAGAAGAAATTAAATCATTGGTAGTCGGTCCTGGTGAAAGACTGATTGTTGAATGTGCAGCAGCAGAAGCAAACTTTGTTCTAATTGGATTTGAAGATGCTTCAACTGCATTCACAACAAGAACATATGCAGCAGACGCAGCATCTAGCTCTGCAAGCGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67a0de3a8715653c28de21381404fed83c2bb37720da42f4e8f71ff87031919a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank