Protein

View in Explore
Genbank accession
GENB_36a461640799 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MHEELPGLSGRVERVLTLLLVVAVVGAGAFLFPRNSAVGDESPLPSPPPLLQRDDDVVTSDPIPTVQIDNGYVWAQDTIGTTVYAVGDFDNAREPLAAPGTELTARSNVLAYDIETGALLPFAPQVNGVVKAVAASPDGSRIYIGGSFTSVNEQARWNIAALDARTGELLSTFKPAIGGTGVYALVAAGSTVYAGGLFTQGNGTARKNLAAFSASNGALMPWAPETDLQVDAMVADPGGAKIIAGGRFSRVNGDTSMRGAAALDRSTGAVDTGWALVQTVKNGATTGKAGIFSLAVDDSAVYGTGWVYADASIGNLEGTFSAEADTGDVRWIADCLGDHYGVYSTGSTVYTTSHTHACSTMGLHPEQNPREHRYAEAYTADVRGTLGRNPHAGGTYKDWEGTPAPSAYAWYPDFYVGNTTGMGQAGLSITGVGDTISIAGEFKGVNQGRFEGIVRFSTDPPGGPSDGPRLSGSAWQPTTTSAVPGRVRVSFPANWDRDDLSLTYELRRTGSSTPVATLSKDSTWWNRPTVVLEDTTAAAGTTPTYTVVARDGDGNTRTSASVSATVAAGTAAEYTGAVLDDGATLYYPLGTSMQDWAGGTSAVPGSGVTAGTPGIENSATGHSALDGSSSGRISSNSRVAVGDSFTTELWFRTTSTRGGKLMGYGDAASGSSGSYDRHLYMRNDGRIVFGVYPGEVRTVESTQSYSDGGWHHAVATLDRTGQKLYVDGELIASESSTTSAQAYSGYWRIGGDNLSGWPGQPSSAYFAGSVDEVAVYPHALTPAQVSSHFALGSGLEAPTAEFTEDVDGAEVTVDGSGSSAQGGAEIVEYRWDFGDGSAQVTGREASHTYETTGDYTITLTVRDSNGLLDSTTREVSVLGPNTPPVAAFSAETNGLSVTVDGSGSDDPDGELASYSWDWGDGTTSTGLTSAHTYSEAGEHTVTLTVTDDRGATAEATRTVTATHADPVVQFDTTVGGLDVTADAGASTASDGATLEYSWDWGDGSPSTDGVVGTHSYAEAGVYEITLSVTDSLGGTAETTSSVTVSAEALAASDTFSRTVSSGWGAADSGGTWTPVGGSAAVASVDGAVGRLALTPGSGRSMVLPSTSLSQSSTDLTYTLEGGPATGAVYVGSEARYGNGTSYRTLAWHRADGTAWLLIQRNGTIVASKAGIPGTWAAGSSFRLRAEVTGDDQPTVRMKVWSADSTEPSGWQLETTDESAGALTAAGASSVYAYRAGSGSGAAPITIDDYLLRDLSGTEEPAVNEAPTAAFTSGVSGLTANLDGSGSSDSDGSISSYAWELGDGSTASGALVDHTYAEAGTYTVTLTVTDDDGATHSTSEDVTVTEDVRAASDAFERTAASGWGTADIGGAWQVTGGSAGVARVTDGSGELALPAGSGRSMVLPSTDLADSTSSVAYTLTGAPSTGALYVGIESRYDGRSVYRSAVWHRADGSIWLLVQRNGAVIASQPLTGRSWNAGDTFRVKTDVIGDDSTTVRVKLWNEGTVEPTSWQLETTDAAADAVTTPGRAGLYAYRAGSGSGQAPIRFDEFVVQEPSPPQAMASTARAAEEPPTSSDGRDDSDDPADADADADAEAEAAAAAAAAAAAAAAAAAAAAARPPDGLRPGCSGRSRDRGPVHGRGALGSSADRRVRRREGRGARGRRRGRACGRGRVRAERRSRLGAGGREFGRPGLRARRGRGEPGAGGERGRGSPSLRR
Physico‐chemical
properties
protein length:1715 AA
molecular weight: 176112,14200 Da
isoelectric point:4,63592
aromaticity:0,07347
hydropathy:-0,29312

Domains

Domains [InterPro]
IPR011047
STR
80–334
IPR011047 G3DSA:2.60.120.200 IPR013783 IPR013783 IPR013783 IPR013783
DC_0966
RBD
1044–1280
DC_0966 DC_0966
GENB_36a461640799
1 1715
Architecture
STR
STR
STR
RBD
STR
RBD
STR 80-334 | STR 623-877 | STR 879-1046 | RBD 1047-1260 | STR 1261-1346 | RBD 1347-1613 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage sp
[NCBI] 		38018 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MT835675.1_CDS_[13616..18763] [NCBI]
Genbank nucleotide accession
MT835675.1 [NCBI]
CDS location
range 13616 -> 18763
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
a75079eca343ed7613a1e1e2174c4022e3c24109d4e13128b46679fa344ca46e

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,8469
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50