Protein

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Genbank accession
YP_009595371.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAWYGTGTVAVTLNSVTVTGTGTQFSANVRVGDAFKGPDGRWYEVTNVASATVISISPAYAGTTATTQAYTIAPIQGYVKESADQLRSITNQYGATLALFGNAANITTLRTNIQAAKSGANSDITSITGLTTALAVSQGGTGGNTQAAARTGLGLGTAATSATSVAQVIDAASMNLPSADLTRLAEAVYAARVNFGFYTGGTTTLNIDTLPNGWVGLVSSTASGTKPPLTGTNWWIETQATYTGGSALQTACRYHGAATTGLVTEIAFRIRNQPGTAWSPWTKVLGTDDAVSSNSDVTAGKLLTVGYQGLGANTCPSVADLNLTSNVNGWTWLTSGSLNSPSGYASGSNLFTMAASAAEGFQILSARNTNGRFAVRRRVSSTWGNWIEPYMPWNVVGTVSGTSTNVTGSVIERGSNAQGDYVKFADGTMICWGSYTSGVLGITGALVGGYASAVSTFAFPATFSAVPFLNATPTHLTCFGVINASTTTATQGAVQFLAVTSQSTAIARRCNWVATGRWAA
Physico‐chemical
properties
protein length:520 AA
molecular weight: 53450,84020 Da
isoelectric point:8,91432
aromaticity:0,09038
hydropathy:0,08673

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPMW
[NCBI] 		1815582 Uroviricota > Caudoviricetes > Plaisancevirus >
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009595371.1 [NCBI]
Genbank nucleotide accession
NC_041880 [NCBI]
CDS location
range 68703 -> 70265
strand +
CDS
ATGGCATGGTATGGCACAGGTACAGTTGCAGTAACTCTCAATAGCGTTACTGTCACAGGTACAGGAACTCAATTCTCTGCCAACGTTCGCGTTGGTGATGCGTTCAAAGGTCCAGACGGAAGGTGGTATGAAGTAACAAACGTTGCTTCCGCTACTGTAATTAGCATTAGCCCAGCGTATGCTGGTACTACAGCAACCACTCAGGCTTACACAATTGCCCCAATTCAGGGTTATGTCAAAGAGTCTGCTGACCAGCTTCGGTCAATTACAAACCAGTATGGTGCAACTCTTGCACTGTTCGGGAATGCTGCAAATATTACAACACTGCGGACAAACATTCAAGCAGCTAAGTCTGGTGCAAACAGTGACATTACGTCTATCACAGGACTCACCACAGCCCTTGCTGTTAGTCAGGGCGGTACAGGTGGCAACACGCAAGCTGCTGCTCGTACGGGTCTTGGTTTGGGGACTGCTGCAACATCAGCAACATCTGTTGCTCAGGTAATCGACGCAGCGAGTATGAACCTTCCTAGTGCTGATTTAACTCGGTTGGCTGAGGCAGTTTACGCTGCACGAGTTAACTTTGGTTTCTACACTGGTGGTACAACAACCCTTAACATTGATACACTCCCTAACGGTTGGGTTGGTCTTGTTTCCTCGACGGCAAGTGGGACTAAGCCCCCTCTTACAGGTACTAACTGGTGGATTGAAACACAAGCAACCTACACAGGCGGATCTGCGTTGCAGACAGCTTGTCGATATCATGGTGCCGCTACAACAGGTCTTGTTACTGAGATTGCTTTCCGTATTCGTAACCAGCCCGGTACTGCATGGAGTCCATGGACTAAGGTTCTCGGTACTGATGATGCTGTATCTAGCAACTCTGATGTTACTGCTGGTAAACTTCTGACAGTTGGTTACCAAGGTTTGGGTGCTAACACCTGCCCTTCGGTTGCTGACCTTAACCTCACATCTAACGTTAACGGTTGGACTTGGCTTACTTCTGGCTCCTTGAACTCCCCTTCTGGTTATGCTTCTGGCTCTAACCTGTTCACAATGGCCGCAAGTGCTGCTGAAGGTTTCCAGATTTTGTCTGCTCGAAACACAAACGGTAGGTTTGCTGTTCGTCGTCGAGTTAGCTCTACATGGGGTAACTGGATTGAACCTTACATGCCATGGAACGTTGTAGGTACTGTATCGGGTACTTCCACAAACGTTACTGGTTCTGTTATCGAACGTGGATCTAACGCTCAGGGTGACTACGTTAAGTTTGCTGATGGTACGATGATCTGCTGGGGTTCTTACACTTCTGGGGTTCTCGGAATCACAGGTGCTCTTGTTGGTGGATACGCATCGGCTGTTAGTACATTCGCTTTCCCTGCAACGTTCAGTGCTGTTCCTTTCCTGAACGCAACACCAACACATTTGACTTGCTTCGGTGTAATCAATGCTTCGACAACCACAGCAACCCAAGGTGCTGTCCAGTTCTTGGCAGTAACTTCTCAATCAACAGCAATCGCTCGTCGCTGCAACTGGGTAGCAACCGGTCGTTGGGCAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa1a0bdfe09cb57bf375cc342ffac138bbfc58f21fdd5c8ff8196b53d7f0fb91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of pf16 and phiPMW: Two novel phages infecting Pseudomonas putida PpG1 Magill,D.J., Krylov,V.N., Allen,C.C.R., McGrath,J.W., Quinn,J.P. and Kulakov,L.A. 2017-09-06 — GenBank