Protein

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UniProt accession
A0A8S5PDC6 [UniProt]
Protein name
L-SHAPED TAIL FIBER protein, BACTERIAL VIRUSES, CAUDOVIRALES
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANAGRVAIVPKGDWSAAVEYKRLDAVAYNNTLYIAKKAVPAGTGTTNTEYWMKCVVGGGGAVATTEEAGIVKPDGDTITVDEDGTIHGAAVNVATTKEAGIVKAGDDINVDAAGEMSLKTDFTVQADLAELTGTEDRKTFFGKIAKAVSTLIAHINNKSNPHGVTKAQVGLGNCNNTADSAKSVKYATTAGTLDGFTDIKNSTPKQAGESTNGRAFYLGFNGGAGVVYCVPNGDMTVGNATNADTVDGKHFTDIQTDAQTRANARLARSGGTMTGNIDMNNNLITNIRILRAMSPNPLYLQSENSVQITNSAANANMDIRCATLHYTGLAADSYRGAKENISLATEERIRKILEIPVEVFDYRPGFGNDQKSVVGVIVDEVEKIIPEAVVIPEDWNKEEFNELLGDMGNKGVPGVDQTKFIPYLIALAQLQQKELDELRQKR
Physico‐chemical
properties
protein length:443 AA
molecular weight: 47187,35610 Da
isoelectric point:5,13116
aromaticity:0,05869
hydropathy:-0,29571

Domains

Domains [InterPro]
DC_0782
STR
2–384
DC_0782
IPR030392
CHP
334–443
IPR030392
IPR030392
CHP
338–390
IPR030392
DC_0227
RBD
368–443
DC_0227
A0A8S5PDC6
1 443
Architecture
STR
RBD
STR 2-384 | RBD 385-443
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PDC6
1 443
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,9814
Central domain 183 381 200 0,1950
C-terminal 382 443 61 0,8345
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-381
C-terminal
382-443

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctvns3
[NCBI] 		2825204 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE04613.1 [NCBI]
Genbank nucleotide accession
BK015391 [NCBI]
CDS location
range 20101 -> 21432
strand +
CDS
ATGGCAAACGCGGGAAGAGTGGCAATCGTACCAAAAGGCGATTGGAGCGCAGCAGTGGAGTATAAGCGGTTGGATGCGGTTGCGTACAACAATACATTGTACATAGCAAAAAAAGCCGTGCCAGCCGGTACGGGAACCACAAACACGGAATACTGGATGAAATGTGTAGTTGGCGGCGGAGGGGCAGTCGCAACGACAGAGGAAGCAGGAATCGTAAAACCGGACGGTGATACGATCACAGTGGATGAGGATGGAACGATCCACGGTGCGGCTGTAAATGTGGCAACAACAAAGGAAGCAGGAATCGTAAAAGCTGGTGATGACATTAATGTGGATGCGGCAGGGGAAATGAGCCTTAAAACGGATTTTACGGTGCAGGCAGATCTTGCCGAATTGACTGGTACAGAGGACAGAAAGACATTTTTCGGAAAGATTGCCAAAGCAGTGAGTACACTGATTGCGCATATCAATAATAAGTCAAATCCGCATGGTGTAACCAAAGCGCAGGTCGGGCTTGGGAATTGCAACAATACGGCAGATAGCGCTAAGTCTGTGAAATATGCTACAACAGCCGGTACGTTAGATGGATTTACGGACATAAAAAATTCCACACCCAAGCAGGCAGGGGAAAGCACGAATGGAAGAGCGTTCTATTTGGGATTTAACGGAGGAGCTGGGGTGGTCTATTGCGTACCCAATGGTGATATGACAGTTGGAAATGCCACAAATGCGGACACTGTTGACGGGAAGCATTTTACAGATATCCAGACAGATGCGCAGACGCGAGCTAATGCGCGGTTAGCGAGAAGCGGCGGAACGATGACCGGGAATATTGACATGAACAATAATTTAATCACAAATATAAGGATATTGCGGGCAATGTCACCAAATCCATTATATCTACAAAGTGAAAACTCTGTGCAGATAACGAATTCTGCCGCTAACGCAAATATGGATATAAGATGTGCGACACTGCATTATACTGGTTTGGCGGCGGATTCTTACCGTGGAGCAAAGGAAAATATCAGCCTGGCAACAGAGGAAAGGATACGAAAGATTCTGGAAATTCCGGTCGAGGTGTTTGATTACCGGCCGGGCTTTGGAAACGATCAGAAAAGCGTGGTTGGTGTGATTGTAGACGAGGTAGAAAAGATAATACCGGAAGCGGTGGTCATACCGGAGGATTGGAATAAAGAAGAGTTTAACGAGTTGCTGGGTGATATGGGAAATAAGGGAGTGCCGGGTGTTGACCAGACAAAATTTATACCATATTTGATCGCACTTGCACAACTGCAACAGAAAGAACTAGATGAACTTAGACAGAAAAGGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
9edd81a67ec5a087a26c4366a38b3ed974a430620e915faeb99c3f6387b0cb34
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7298
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50