Protein

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Genbank accession
BFM93313.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQRKSVKTLFGALALAIVLSACGGGGGGSNGSTTNAGAAPDQPATGKTLSGKAIDGYLSNATVCVDLNYNGACDAGEPAAKTDDKGNYSIAYSGDLTGKKLLVVIDPNTRDQNRPNYVFPATFALTASVDGDTAQNVTPLTTMQQSLMENGYSKDDATAAVVSFVGGSVNLRDDYVANGDSNTTAFAAKVVDKVAEFAKNGNADADVVRGVMNAVVIKGGIDNVTQADVDALAAKPVLSTDVDAKTVLASGLYAHHEYLSMNMQRVLMREHFIQTGDGVRNALEANVNGQWTEPDTNSYGSYIGNYQLKADGNWSNLISVADQQKFSTVQSAVGNTVTLTDAITGGTTKIELRKVVVGGKTFVDAMTGWIEDYVRTQLQGGFKAGQVGYVTISTRSDDLVHLDQWNCFTTNPTLTVTEDGITHCNWVGDHDTTYTSINQIIGTPVDLNGQVRTTLNVDGTGTMVDKFSNKVIAGPGQFTWTRHAKNPNVIIFNVANELLLTAAVPYSNEVYHGHKLGLALHGGHIEQIHIEAAPALKSVLNFDQAGFNDLFAAEQNVQY
Physico‐chemical
properties
protein length:559 AA
molecular weight: 59284,31210 Da
isoelectric point:5,02487
aromaticity:0,07335
hydropathy:-0,17835

Domains

Domains [InterPro]
PS51257
STR
1–22
PS51257
DC_2059
STR
1–559
DC_2059
BFM93313.1
1 559
Architecture
STR
STR 1-559
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BFM93313.1
1 559
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,7571
Central domain 276 519 245 0,6753
C-terminal 520 559 39 0,4559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-519
C-terminal
520-559

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC1-1B
[NCBI] 		3157661 No lineage information
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM93313.1 [NCBI]
Genbank nucleotide accession
LC819005 [NCBI]
CDS location
range 33620 -> 35299
strand -
CDS
ATGCAACGCAAGTCTGTCAAAACCCTGTTCGGTGCGCTCGCACTGGCAATCGTCCTCTCCGCCTGCGGCGGCGGAGGTGGTGGCTCGAATGGTTCGACCACGAACGCAGGCGCTGCGCCTGACCAGCCCGCAACGGGCAAGACCCTCTCCGGCAAGGCCATCGACGGCTACCTGTCGAACGCCACCGTGTGCGTCGACCTGAACTACAACGGCGCATGCGATGCAGGCGAACCGGCAGCGAAGACCGACGACAAGGGCAACTACTCGATCGCGTACAGCGGTGATCTGACCGGCAAGAAGCTGCTCGTCGTGATCGATCCGAACACCCGCGACCAGAACCGTCCGAACTACGTGTTCCCGGCCACGTTTGCCCTGACCGCTTCGGTCGACGGCGACACGGCGCAGAACGTCACGCCGCTCACCACTATGCAGCAATCGCTGATGGAAAACGGCTACTCGAAGGACGATGCGACGGCTGCCGTCGTCTCGTTCGTGGGTGGTTCGGTGAATCTGCGTGATGACTACGTGGCCAACGGCGACAGCAACACCACGGCCTTCGCGGCCAAGGTGGTCGACAAGGTTGCCGAGTTCGCCAAGAACGGCAACGCCGACGCTGACGTGGTCCGTGGCGTGATGAACGCTGTGGTGATCAAGGGCGGGATCGACAACGTCACGCAAGCTGACGTGGATGCGCTGGCTGCCAAGCCGGTGCTCTCGACCGACGTGGATGCCAAGACGGTGCTCGCAAGCGGCCTCTACGCTCACCACGAATACCTGTCGATGAACATGCAACGTGTGCTGATGCGCGAGCACTTCATCCAGACGGGTGACGGCGTGCGCAATGCCCTCGAAGCCAACGTCAACGGTCAGTGGACGGAACCGGATACGAACAGCTACGGCAGCTACATCGGCAACTATCAGCTGAAGGCTGACGGCAACTGGTCGAACCTGATTTCGGTGGCTGACCAGCAGAAGTTCTCCACGGTGCAATCGGCTGTGGGTAACACGGTGACGTTGACCGACGCAATCACGGGCGGCACGACCAAGATCGAACTCCGCAAGGTGGTGGTCGGTGGCAAGACGTTCGTCGATGCGATGACGGGCTGGATCGAGGACTATGTCCGCACGCAACTGCAAGGAGGTTTCAAGGCTGGCCAAGTCGGCTACGTCACGATCAGCACGCGCAGCGATGACCTGGTGCATCTGGACCAGTGGAATTGCTTCACCACCAACCCGACTCTCACGGTGACCGAAGACGGCATCACCCACTGCAACTGGGTGGGCGATCACGACACGACCTACACGTCAATCAATCAGATCATCGGTACGCCGGTGGACCTGAACGGTCAAGTCCGTACGACGCTCAACGTAGACGGCACGGGTACGATGGTCGACAAGTTCTCGAACAAGGTTATCGCAGGCCCGGGCCAGTTCACCTGGACGCGTCATGCGAAGAACCCGAACGTGATCATCTTCAACGTCGCGAACGAGCTGCTCCTCACGGCTGCGGTGCCGTACTCGAACGAAGTCTACCACGGTCACAAGCTGGGCCTGGCGCTGCACGGTGGTCACATCGAGCAGATCCACATCGAAGCGGCGCCGGCGCTCAAGTCGGTGCTCAATTTCGATCAGGCAGGTTTCAACGACCTGTTCGCGGCTGAGCAGAACGTGCAGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a97876360cbc561e706acf43f14fde8ab1091f61ce526560f89e94c61b2f5e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6976
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank