Protein

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Genbank accession
WCZ57942.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEAMSYSPVIVSTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARITKRLNFSDVYKVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34383,39340 Da
isoelectric point:5,14969
aromaticity:0,13378
hydropathy:-0,23177

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
WCZ57942.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57942.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6104
Central domain 288 288 2 0,6692
C-terminal 289 299 10 0,5845
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K38
[NCBI] 		3027626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57942.1 [NCBI]
Genbank nucleotide accession
OQ291035.1 [NCBI]
CDS location
range 94072 -> 94971
strand -
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTACGATGTACAAACCTCCTACGAAGAATTTAAGACTCTTCGTAGGACTATTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCTTCTTCCATATCATTAGCAATAAATTTTAGTAATACACTTACTGAAGCTAACTTTTTTGAGTGGCTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTACCACTATATAGTAACAATATTGAACCTATTATGTTTAATATCTATATAGTAAATAAAGATAATAACTGTGTATATTTTGAGAACTGCTATGTATCTACTGTAGATTTTTCTTTGGATAAGAATATACCAATTCTTAACGTTGGTATCGAATCAGGGAAATTCTCCGAAGTATCTACATATAGAGAAGCAGCTTCTATTATACAGGGTGAAGCAATGTCTTATAGCCCGGTAATAGTTTCTACTAACGGTAGCATTTTACCTGGTCTTATTTCCGCTTCTTTATCTTTTCAACAGCAGTGCTCCTGGAGAGAGGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCTTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATATTACTTAAAACGCTTTGCTGGAGATATGGTTTACAATATTGAACCAGAGACCGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTTAGCACGTATTACAAAACGCCTAAATTTCTCAGATGTGTATAAAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCTGTGAGAATAGATTTCTTTGGAGAAATTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f42333d87cdd3c8c756475ee9fd995696271ffbd6af35f59c4b938590877e7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K38 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank