Protein

View in Explore
Genbank accession
WQA18348.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKEDATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGATSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGHGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLEPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLNFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93903,85950 Da
isoelectric point:5,22444
aromaticity:0,09742
hydropathy:-0,36925

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
WQA18348.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQA18348.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9661
Central domain 232 430 200 0,6553
C-terminal 431 852 421 0,1682
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_TUMS_E6
[NCBI] 		3079603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQA18348.1 [NCBI]
Genbank nucleotide accession
OR424354.1 [NCBI]
CDS location
range 21298 -> 23856
strand +
CDS
TTGGCGCTAGTAATACACTACACACGAAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCAATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAGACGCGACTTTCCACATTGTGGAATCCGCTGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGACCTCTAACCTTGCGAACTCGCAGGCAGATTCCCCAAACAACAGTCTTACCGACCGCAACAACAAGGCGCGTCCGTACGAGCGCAGCTACGATATCTGCGGGACGGTGCAAACCATCCCTAATAACCTTATGACTACTTATAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGCTACTACGACGCCGGCCACGGCTACCTCGACATCCACCCGGACGGTATAACTGACGGGGATACCCGCGTATCAGATATAACAGGTACGTCGGTTGCCGTGTACGCACCTTATACGTCACCAAATAATACATCCACGCCACAGGTAATGGTCGGAGACCCCATAGAGCAAGGCCTGTATATTACCGTAGAATCTAACGAAGTCGATGGTGTGGTTCTTAAAGCACCCAACGGTCTGGGTATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCAGGGAACATCGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGAGCCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACGGACGTCGACTTGTCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATCGTGCCTGGCGGCCTTATCGGGCGATGGCAAGAAATAAGACCCGGTTCGTTTTTCCGCGGTGACGGGGAAGCGTCGCTGCAACCAGACAACACGTATGAGAAAACCTTAACCGATTGGGTTTCAATAAACCGTACCGAGGTTGAGCGTATAGTCGCCAATATCGCTGCTGCCAATGGCATGTATAAAGACAACGGCAAGTCAAAAACACTGGCGTCGGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAACAGCGTTCCTTACGGGCCAATATACACGGCGCAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGTGTGCGCGCCAGAAGGGTGACAGACCTCAACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACTGTACACTCGATGCGCAAGCAGACACCGCGTGCTGCAGAAGTTAAGCAACCACAGTTGCGCATGATTGCGACCGAAATGGTATACAAATACCTTGGTAATGGCGTTTTTGAGGATACGATGACTCCCAATACCCAGGCCGTGCAATCTCTCATCCGCCTGGCACGTGACCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGCGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCCGACGCTATCTTCTGTACTCCATACAGGCGTGGGGCGGATATCCTTCTCGATTTTGAACGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGTAAGGCCGGTACTTCCGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCCGCTAATCGCCGTCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTGCCAAATCGTGCCATTAGTGTCGTTAAGGGCTCGCGTATGGCTACTTACGACGGATACGTAACTGCGGTGAACGGCCTCACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTCTTTGGTTCTCAAGCTGAGAGATGGCGGCGTCCAAAGTGTTCGTGTAGTCCCTGGTGCGCATGACCGACAAGTAATTATGACTTCTGTACCGCAGGAAGCCATTTACACAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTAGACCCTGGCGATGACCGAACAGTCAAAATAACCGGGTTCAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ad366297089b88960dcc3b8e46981547df3a9655961f3e9cb0576a34e494daf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8188
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Characterization, and Genome Analysis of Salmonella phage vB_SenS_TUMS_E6 Torkashvand,N., Kamyab,H., Shahverdi,A.R., Khoshayand,M.R., Karimi Torshizi,M.A. and Sepehrizadeh,Z. 2023-04-25 — GenBank