Protein

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Genbank accession
XRX15355.1 [GenBank]
Protein name
MFS-type transporter
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MIHSSSSRLLAADAPRESRGGRIRNAFAVGRTRWGMLALVFFATTLNYIDRAALGVMQPILAEKMSWTAMDYANINFWFQVGYAIGFILQGRFIDKVGVKRAFFLAVLLWSLATGVHGLATSAAGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAVATGIFNAGTNVGAMVTPALLPLILGVWGWQAAFLCMSALGLVWLVFWWRNYYNPEEHPRVKQSELEYIQQQEEPPATRVPFSQILRRRGTWAFALAYSITAPVFWFYLYWLPPFLNQQYGLGISVTQMGIPLILIWLTADFGSVGGGILSSWLIGRGMPAIRARLLSMLLFACTIVGVVFAANASGLWIAVLAIALAVGAHQAWTANIWSLVMDYTPKHLMSTVFGFGGMCAALGGMFMTQIVGGLLTATNNNYAVLFTMIPAMYFIALTWLYFMAPRRIEA
Physico‐chemical
properties
protein length:441 AA
molecular weight: 48745,93780 Da
isoelectric point:9,75499
aromaticity:0,14286
hydropathy:0,58707

Domains

Domains [InterPro]
IPR036259
STR
25–438
IPR036259
G3DSA:1.20.1250.20:FF:000036
Unmapped
26–223
G3DSA:1.20.1250.20:FF:000036 IPR036259
IPR036259
STR
28–222
IPR036259
cd17319
STR
30–434
cd17319
IPR050382
Unmapped
31–434
IPR050382
cd17319
STR
33–434
cd17319
IPR020846
STR
36–439
IPR020846
IPR011701
STR
40–397
IPR011701
XRX15355.1
1 441
Architecture
STR
STR 25-440 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX15355.1
1 441
Domain Start End Length (AA) Confidence
N-terminal 1 237 237 0,0784
Central domain 238 430 194 0,3395
C-terminal 431 441 10 0,8570
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-237
Central
238-430
C-terminal
431-441

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_GXNNB6
[NCBI] 		3413497 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX15355.1 [NCBI]
Genbank nucleotide accession
PV425003 [NCBI]
CDS location
range 44152 -> 45477
strand -
CDS
ATGATCCACTCTTCCAGCTCTCGACTGCTCGCCGCCGACGCCCCGCGGGAATCCCGCGGCGGCAGGATCCGCAACGCCTTCGCCGTCGGCCGGACGCGCTGGGGCATGCTCGCCCTGGTGTTCTTCGCCACCACCCTGAACTACATCGATCGCGCCGCCCTCGGCGTGATGCAGCCGATCCTGGCCGAGAAGATGAGCTGGACGGCAATGGACTACGCCAACATCAACTTCTGGTTCCAGGTCGGCTACGCCATCGGCTTCATCCTCCAGGGCCGCTTCATCGACAAGGTCGGGGTCAAGCGCGCGTTCTTCCTCGCCGTGCTGCTCTGGAGCCTGGCCACCGGCGTCCACGGCCTGGCGACCTCGGCGGCGGGCTTCATGGTCTGCCGCTTCATCCTCGGCCTGACCGAGGCGGCCAACTACCCGGCCTGCGTGAAGACCACCCGCCTGTGGTTCCCCGCCGGGGAACGGGCGGTGGCCACCGGCATCTTCAACGCCGGCACCAATGTCGGCGCGATGGTCACCCCGGCCCTGTTGCCGCTGATCCTCGGCGTCTGGGGCTGGCAGGCGGCGTTCCTCTGCATGTCGGCGCTGGGCCTGGTCTGGCTGGTGTTCTGGTGGCGCAACTACTACAACCCCGAGGAGCATCCGCGGGTGAAGCAGAGCGAGCTGGAATACATCCAGCAGCAGGAGGAGCCGCCCGCCACCCGCGTGCCCTTCTCGCAGATTCTCCGCCGCCGCGGCACCTGGGCCTTCGCCCTGGCCTACTCGATCACCGCGCCGGTGTTCTGGTTCTACCTCTACTGGCTGCCGCCGTTCCTCAACCAGCAGTACGGCCTGGGCATCAGCGTGACGCAGATGGGCATCCCGCTGATCCTGATCTGGTTGACCGCCGACTTCGGCAGCGTCGGCGGCGGCATCCTTTCGTCCTGGCTGATCGGCCGCGGCATGCCGGCGATCCGCGCGCGCCTGCTGTCGATGCTGCTGTTCGCCTGCACCATCGTCGGCGTGGTGTTCGCCGCCAACGCCAGCGGCCTGTGGATCGCCGTGCTGGCCATCGCCCTGGCGGTCGGCGCACACCAGGCGTGGACGGCGAACATCTGGAGCCTGGTGATGGACTACACGCCCAAGCACCTGATGAGCACGGTGTTCGGCTTCGGCGGCATGTGCGCGGCGCTGGGCGGGATGTTCATGACCCAGATCGTCGGCGGCTTACTGACCGCGACGAACAACAACTACGCGGTGCTTTTCACCATGATCCCGGCGATGTACTTCATCGCCCTGACCTGGCTGTACTTCATGGCCCCGCGCCGGATCGAAGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d33c4320e34251e89491803713641eaf6ebb585abf2c448252f9f244e4fd0ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8926
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50