Protein

View in Explore
Genbank accession
UZV40814.1 [GenBank]
Protein name
putative EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTSLIGSTSALFVVRLSAPVTEKVTVAWQTEDGTGHAGIDYEAGAGTVEFAPGETEKGIEVVVLGREDGSTGNGLTFYVRLRPPVNAVLLDELSECRISVETDEGVVTTSLVVATGPHGKKGDPGLSAYELAKVQGYEGSLTDWLGGAGVQAVVMASQAAAQAKEQLNRAFRFEPGNKVPELPPIEQMEGKIVVVRNGAPVGMEASNDTALGLAVNLGKNNGSSMVGHTDKADGKTKTVGQTLDRLADEDAALKKTAQDRQDALNGAMGFSQIGQVASWAALATVVPTKADQQVILRGWNAGSTHGGGIFKAVAGAATSDGGTVCPVNGQWYWKRVQEDALLTIYDFGAVVDGKTDDMPAVKAMFEATRKNAVANPVGIRLPAGVIALSGTLDLSGSTEQPMFRLKAPDVEFGVVPVTKIVPLDKTSTVPLFQLNARRLEVTGIHIDTTTDNVKPFLKNVCPRGEYVRVKSFRVNNSAGLTFDLVDTIDTKFEQVYCYSISGGFIRTSWSNLDPGGWNHPTAIEISNANFSSSKKVEPIRAIRAGQSIMRNVWFSNNEYTFDISQGGWLFDTVIMENSTYPAKVKYAKIFKTNCRFEQGATLDEEGTDFDPSWDQGKPLPTWVTNAMDQGGVDLRITGSRFNCGVSTQFDFSDTILTNTTNAEKWVEVGRVILQDRGRTAHMRLLGTSGWNSAAGEMKVPAGTGFGGGEANIFIESKEPTTESTGIIEVHWHGEGASPIQDVKYVRAYSTVTIYVKMAAYCLSAALFIDSNGVSRAQSGRPFYTRLTNVDVADINAIPNLKQASARWAINKGVYNDNGLGMDLDSGDLLLYTKKKMSKGAADYVPVMLNGEPFNIQVVDKFAVRVPYYVFDELPSPSDYVYCQVLCSNTAKSPSMQMLYSNGYRWIYVAYPTERVTKIADGSPIINN
Physico‐chemical
properties
protein length:928 AA
molecular weight: 100080,77020 Da
isoelectric point:5,35818
aromaticity:0,08513
hydropathy:-0,18761

Domains

Domains [InterPro]
IPR038081
ATT
3–105
IPR038081 DC_0717 DC_0716
IPR038081
ATT
8–107
IPR038081 IPR011050
IPR003644
ATT
12–66
IPR003644 IPR012334
UZV40814.1
1 928
Architecture
ATT
ATT
STR
ATT 3-107 | ATT 246-365 | STR 366-863 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UZV40814.1
1 928
Domain Start End Length (AA) Confidence
N-terminal 1 357 357 0,9965
Central domain 358 687 331 0,9843
C-terminal 688 928 240 0,8126
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-357
Central
358-687
C-terminal
688-928

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Stean
[NCBI] 		2995679 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZV40814.1 [NCBI]
Genbank nucleotide accession
OP743926 [NCBI]
CDS location
range 48869 -> 51655
strand -
CDS
ATGAGCACCAGCCTAATTGGCTCAACCAGCGCCCTGTTTGTTGTCAGACTGTCAGCGCCCGTTACTGAAAAGGTAACAGTGGCGTGGCAGACCGAAGATGGCACAGGGCACGCGGGCATTGACTACGAGGCCGGAGCCGGCACCGTGGAATTTGCCCCGGGGGAAACTGAAAAGGGGATCGAGGTAGTCGTGCTGGGCCGTGAAGACGGTTCAACCGGCAACGGCCTGACCTTCTATGTGCGTCTGCGCCCGCCGGTGAATGCCGTGCTGCTGGACGAATTGAGCGAGTGCCGGATCTCCGTTGAGACGGACGAGGGCGTTGTGACCACTTCGCTGGTGGTGGCGACCGGTCCTCACGGCAAGAAGGGCGATCCGGGCCTCAGCGCTTACGAGCTGGCGAAGGTGCAGGGCTACGAGGGCAGTCTGACCGACTGGCTGGGCGGTGCCGGCGTGCAGGCTGTTGTCATGGCCTCACAGGCGGCCGCGCAGGCGAAAGAGCAGCTGAACCGGGCTTTCCGCTTCGAGCCGGGCAACAAGGTACCCGAGCTGCCGCCGATCGAGCAGATGGAAGGTAAAATCGTGGTGGTGCGCAATGGCGCTCCAGTGGGGATGGAAGCCAGCAACGACACTGCGCTGGGCCTCGCTGTCAACCTCGGTAAGAACAACGGCTCCAGCATGGTGGGCCACACAGACAAGGCAGACGGGAAAACCAAAACCGTAGGCCAGACCCTCGACCGTCTGGCGGACGAGGATGCAGCACTGAAGAAAACCGCACAGGACCGTCAGGACGCACTGAACGGCGCAATGGGCTTCTCGCAGATCGGGCAGGTGGCATCATGGGCGGCATTGGCGACCGTTGTGCCGACTAAAGCTGATCAGCAGGTCATTCTGCGCGGCTGGAATGCAGGCTCCACCCACGGCGGCGGCATCTTTAAGGCTGTTGCAGGTGCGGCCACCAGCGATGGCGGTACCGTCTGCCCGGTGAATGGCCAGTGGTACTGGAAGCGCGTTCAGGAAGATGCGTTGCTCACCATTTACGATTTCGGCGCGGTGGTGGACGGCAAGACCGATGACATGCCGGCAGTCAAAGCGATGTTCGAGGCGACCCGCAAGAATGCCGTGGCAAACCCTGTAGGCATTCGCTTGCCAGCTGGTGTGATTGCGCTGTCAGGAACGCTGGACCTTTCCGGATCCACCGAGCAGCCGATGTTCCGACTAAAGGCTCCGGACGTCGAGTTCGGCGTGGTGCCCGTCACCAAGATTGTGCCGCTGGACAAAACCAGCACCGTGCCGCTGTTCCAGCTGAACGCGCGCCGTCTGGAAGTGACCGGCATCCACATCGACACGACCACCGATAACGTGAAGCCGTTCCTGAAGAACGTGTGTCCGCGCGGTGAGTACGTCCGCGTGAAGTCGTTCCGCGTCAACAACTCCGCAGGCCTGACGTTCGACCTCGTGGACACCATCGACACCAAATTTGAGCAGGTCTACTGCTACAGCATTTCGGGCGGCTTCATTCGCACCAGCTGGTCAAATCTGGATCCGGGCGGCTGGAACCACCCAACGGCTATCGAAATCTCGAATGCCAACTTCTCCAGCTCGAAGAAGGTGGAGCCTATCCGCGCTATCCGCGCCGGTCAGTCCATCATGCGCAACGTCTGGTTCTCGAACAACGAATACACCTTCGACATTTCGCAGGGTGGCTGGCTGTTCGATACGGTCATCATGGAAAACAGCACGTACCCGGCCAAGGTCAAGTACGCCAAGATTTTCAAAACCAACTGCCGCTTTGAGCAGGGTGCAACGCTGGATGAGGAAGGTACCGACTTCGACCCGTCATGGGATCAGGGCAAGCCATTGCCAACGTGGGTAACGAACGCCATGGATCAGGGCGGTGTTGACCTTCGCATCACCGGTTCGCGCTTCAATTGCGGCGTGTCCACGCAGTTCGACTTCTCAGACACTATCCTGACCAACACCACCAACGCTGAGAAGTGGGTGGAAGTTGGCCGTGTCATCCTTCAGGACCGTGGCCGCACCGCGCATATGCGTCTGCTGGGTACCTCGGGCTGGAACAGCGCAGCGGGCGAGATGAAGGTGCCTGCCGGTACCGGCTTCGGTGGCGGTGAGGCGAATATCTTCATCGAAAGCAAAGAGCCGACCACAGAGAGCACCGGTATTATCGAGGTTCACTGGCATGGTGAGGGCGCATCCCCGATCCAAGACGTGAAGTACGTTCGCGCCTATTCTACGGTCACAATCTACGTGAAGATGGCGGCCTACTGCCTCAGCGCGGCCCTGTTCATCGACAGTAACGGCGTCTCGCGCGCGCAGAGCGGCCGGCCGTTCTACACCCGCCTGACCAACGTTGACGTTGCAGACATCAACGCGATCCCGAACCTGAAGCAGGCGTCCGCGCGCTGGGCCATCAACAAAGGCGTGTACAACGACAACGGCCTCGGCATGGATTTGGATAGCGGCGACCTGCTGCTTTACACCAAGAAGAAGATGAGCAAGGGCGCAGCGGATTATGTCCCGGTCATGCTCAATGGCGAACCGTTCAATATTCAGGTAGTGGATAAGTTCGCTGTCCGCGTTCCGTATTACGTCTTCGATGAGCTGCCATCGCCATCGGATTACGTGTATTGTCAGGTTCTGTGTTCCAACACGGCAAAAAGTCCATCCATGCAGATGCTGTACTCAAACGGCTATCGCTGGATTTACGTGGCTTACCCGACCGAGAGAGTTACGAAAATCGCCGATGGTAGCCCCATCATCAACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
223ed020ff93ac2bbae11ca56509f4ab2ea77fde83f6701b4b30ebc5865d8116
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Erwinia amylovora bacteriophage Stean Besarab,N.V., Belalov,I.S., Babenko,V.V. and Letarov,A.V. 2020-04-22 — GenBank