Protein

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Genbank accession
AGH57308.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MSKLYVGDIAGPILGVVRTQAGTTMKINFELDARCGNGALKLPTISNAQRPTNPVAGQLCYNTEQNRAEIYNGANWIAVSVSTELAAGMVATGGNFIYDYDGWRIHTFTSNGTFNVSSAGYAEVLLVGGGGGGGGRSGGGGGGGGVVYYGAEQPRLGTEKHFPTTGNHTVTVGIIGGGGSGTGVPGNNGGDTTITGPGSFTTITAIGGGGGGADGQNTGSNGGSGGGGRYDANGGTAQQPGSTTGGFGTNGGYGTSSTWNAGGGGGSLMPGNRGWGPSTGGNNSVSGECGDGGVGLQYKITGANKYYAGGGGGGSHDPAHTGGFGGPGGGGNGGAPGGGNGGIGAVDNTGGGGGGGSTSSGNGGGGGAGGTGVVVIRYRI
Physico‐chemical
properties
protein length:380 AA
molecular weight: 35823,11130 Da
isoelectric point:6,50394
aromaticity:0,06842
hydropathy:-0,31553

Domains

Domains [InterPro]
DC_0654
STR
5–307
DC_0654
IPR049304
STR
109–379
IPR049304
AGH57308.1
1 380
Architecture
STR
STR 5-379 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM2
[NCBI] 		536464 Uroviricota > Caudoviricetes > Pantevenvirales > Ahtivirus > Ahtivirus sagseatwo
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57308.1 [NCBI]
Genbank nucleotide accession
JF974292 [NCBI]
CDS location
range 34575 -> 35717
strand -
CDS
ATGAGTAAATTATACGTTGGAGATATAGCAGGTCCTATTCTTGGTGTTGTAAGAACTCAAGCAGGAACCACCATGAAGATCAACTTCGAGTTGGATGCTCGATGTGGTAATGGTGCTTTGAAACTCCCTACTATTAGTAATGCTCAGAGACCTACCAATCCTGTTGCAGGTCAGTTATGTTATAACACTGAACAAAACAGAGCTGAGATATACAATGGTGCCAATTGGATTGCTGTTAGTGTATCGACTGAACTTGCTGCTGGTATGGTTGCAACTGGTGGCAATTTTATTTACGACTATGACGGTTGGCGCATTCATACATTTACTAGTAACGGTACATTCAATGTGTCTTCTGCTGGATATGCTGAGGTTCTGCTAGTAGGTGGCGGCGGAGGCGGCGGAGGTCGCTCTGGTGGCGGCGGAGGCGGCGGTGGAGTCGTCTATTATGGTGCTGAGCAACCAAGACTTGGTACAGAAAAGCATTTTCCTACCACTGGTAATCATACTGTTACTGTAGGAATTATTGGTGGGGGCGGTTCTGGTACTGGAGTTCCTGGAAATAATGGTGGTGATACTACTATTACTGGTCCTGGATCATTTACAACTATCACTGCTATTGGTGGTGGCGGAGGTGGTGCTGACGGTCAGAATACTGGATCCAACGGTGGATCTGGTGGCGGTGGTAGATATGATGCCAACGGTGGTACTGCACAACAACCTGGATCTACTACAGGTGGTTTTGGCACTAATGGTGGTTATGGTACATCTAGCACCTGGAATGCAGGTGGTGGAGGTGGTTCACTGATGCCTGGAAACAGAGGTTGGGGTCCATCTACGGGTGGAAACAACTCCGTCTCTGGTGAATGTGGTGATGGTGGTGTTGGTCTTCAGTATAAAATTACTGGTGCTAATAAGTATTATGCAGGAGGCGGTGGTGGAGGATCGCACGACCCCGCTCATACTGGAGGTTTTGGTGGTCCTGGTGGCGGGGGTAATGGCGGTGCGCCTGGTGGAGGCAACGGGGGTATCGGTGCCGTAGACAACACTGGCGGCGGCGGTGGAGGAGGTTCAACCAGCTCTGGCAACGGCGGTGGCGGTGGCGCAGGTGGTACAGGTGTAGTAGTTATCAGGTATAGAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a423cb25a6b5884f02ac5bf8d177097ad3775512650428f9abcdb0e12ad88e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank