Protein

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Genbank accession
QPI17927.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MADLKSGTTVGGSNIWHQSNLPLQPTGDQIAFKGFKIYTSADKPTPLELGALALTGGTLTGNVDTNSQINFGNSTQSIPDITQLSNSASAAANQLRRFRSHNAGLIWSEQVSNSAYSLGVGTKQAINLDVNTNKASFSGELISYNSNGNGFRVVDLVTNKGSFIRNDGTRTYFLVTNANDPLGSYNSLRPFSFDMSTGLVFLDNGFTTNALSTFNSNVTFNAPVTLQDRISSPAVNLDVNGGVIANAYAIAAYNGASGVVQMTGRLSINQTITGEMIRFNADLNRSGYLLALNGGVNDWYIGRGSNSNRSISWNSYQNNNGVTLEQSGNISLKVGTNGWIGTNGYYFSDIGFRSNLGEFLLDNSSGSITIASTSKADNRIPFIQFSGNGTSKANTFWVGPENGVTGSALTKYGMFSNVSFGSMVALNSDGGVTLRTSGTVSEITCAPTGIIYLNSPNHVQVNSVLAVRGSSIELGTVDTVSTPALDFHSSNTGNDYDARIIASGGSATVGQGSLSLIAAGGVTVSNNLTAVNLTTTQNVIANGVLRAGGTGGATYQADGNIAGSAWGSSGLKSYVDNKVNNQNESGLYIKAHASLAWYGHEEMVFKSIDANTLEFTYNIGWRTQRLVVGKTRAMLLKQAVAPIPGNPSANYIPIEGNGLFTVVYASTPDNSTVNTVRISYPNHGIAVGQTKIFRLCGFIYEMSGMTWSGNIQDQGWAQFFTLDTPRTTQNAPIISSPGYLDMYWDVRFNPNGKGTLPNDLTMVASKTYTIDNSRFAFVGVGYNGTIYKSDGVSILVYDYR
Physico‐chemical
properties
protein length:800 AA
molecular weight: 85023,33780 Da
isoelectric point:6,67269
aromaticity:0,09625
hydropathy:-0,15275

Domains

Domains [InterPro]
DC_0505
ATT
1–380
DC_0505 G3DSA:6.20.70.20
IPR048390
ATT
110–191
IPR048390 G3DSA:6.20.80.10 G3DSA:6.20.70.20
IPR048388
ATT
280–328
IPR048388
QPI17927.1
1 800
Architecture
ATT
RBD
ATT 1-380 | RBD 550-580 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI17927.1
1 800
Domain Start End Length (AA) Confidence
N-terminal 1 473 473 0,1114
Central domain 474 672 200 0,3706
C-terminal 673 800 127 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-473
Central
474-672
C-terminal
673-800

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage POP12
[NCBI] 		2741065 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17927.1 [NCBI]
Genbank nucleotide accession
MT560058 [NCBI]
CDS location
range 91181 -> 93583
strand +
CDS
ATGGCAGATTTAAAATCTGGTACTACAGTAGGCGGTTCGAATATATGGCATCAGAGTAATTTGCCCTTGCAGCCTACAGGCGATCAAATCGCTTTTAAAGGATTCAAAATTTATACCAGTGCAGATAAACCAACTCCATTGGAATTGGGTGCTCTTGCTTTGACTGGCGGAACCCTTACAGGAAATGTTGATACAAATTCTCAAATCAATTTTGGTAATTCTACTCAATCAATTCCTGATATTACTCAGTTGTCAAATTCGGCATCAGCAGCAGCAAATCAATTAAGGCGTTTTCGTAGCCATAACGCTGGTTTAATATGGTCTGAACAAGTATCAAATAGCGCATATTCTTTAGGAGTTGGGACAAAACAGGCAATTAATCTTGATGTTAATACAAATAAAGCATCATTTTCTGGTGAACTTATTTCTTATAATTCAAACGGAAATGGATTTCGTGTTGTTGATTTAGTAACCAATAAAGGTTCTTTTATTAGAAATGACGGAACAAGAACTTATTTTCTGGTTACAAACGCTAACGATCCATTAGGAAGTTATAATAGTTTGAGGCCATTTTCTTTTGATATGTCTACAGGTTTGGTGTTTTTGGATAATGGATTTACTACTAATGCACTTAGCACATTCAATTCAAACGTAACGTTTAATGCTCCTGTTACTTTGCAGGATAGAATTAGTAGCCCTGCTGTTAACTTAGATGTCAATGGTGGTGTAATTGCTAATGCGTATGCTATTGCTGCTTATAATGGTGCGTCTGGTGTAGTTCAGATGACTGGTAGATTGTCAATAAACCAGACAATAACCGGGGAAATGATTCGTTTTAACGCAGATCTAAACCGTAGTGGTTATCTGTTGGCGTTGAATGGCGGCGTTAATGATTGGTATATAGGTAGAGGTTCCAACTCAAACCGTTCTATTTCTTGGAATTCATACCAAAACAACAACGGTGTCACGTTAGAACAGTCAGGAAATATAAGTTTAAAAGTAGGAACAAATGGTTGGATTGGAACAAATGGTTATTATTTCTCTGATATTGGATTTAGATCTAACTTAGGTGAATTTTTATTAGATAACAGTTCTGGTTCTATAACTATTGCTTCGACTTCAAAAGCAGATAATAGGATTCCTTTTATTCAATTTTCTGGTAATGGAACATCAAAAGCGAATACTTTCTGGGTAGGCCCAGAAAACGGAGTAACTGGATCTGCATTAACAAAATATGGGATGTTTAGTAATGTTTCTTTCGGTTCTATGGTTGCATTAAACTCTGACGGTGGAGTTACGTTAAGAACTTCTGGTACTGTTTCAGAAATTACTTGTGCTCCTACCGGAATAATTTACTTGAATTCTCCTAATCACGTTCAAGTTAATTCCGTTCTGGCTGTTCGCGGTTCTTCTATCGAACTAGGAACTGTTGACACTGTTTCTACACCTGCTTTAGATTTTCATTCATCTAATACAGGCAATGATTATGATGCTAGAATTATTGCTAGTGGTGGTAGTGCAACTGTAGGACAAGGTTCTCTTTCGTTGATTGCTGCTGGCGGGGTGACTGTATCTAATAATTTAACCGCAGTTAATTTGACGACAACACAGAACGTTATTGCTAACGGAGTATTACGAGCAGGCGGAACAGGTGGTGCAACATATCAAGCAGATGGTAATATTGCTGGTTCTGCATGGGGTTCTAGCGGCCTTAAAAGCTATGTAGATAATAAAGTTAATAACCAAAATGAAAGTGGTTTGTATATTAAAGCACATGCTTCTTTAGCTTGGTATGGTCATGAAGAAATGGTTTTTAAATCCATCGATGCTAATACACTTGAATTTACATACAACATTGGTTGGAGAACTCAAAGATTAGTTGTAGGTAAAACAAGAGCAATGTTATTAAAACAGGCTGTTGCTCCGATACCCGGAAATCCATCAGCAAATTATATTCCAATTGAAGGAAATGGATTATTCACTGTTGTTTATGCATCAACTCCTGATAATTCAACCGTAAACACAGTAAGAATTAGTTATCCAAATCACGGAATAGCAGTAGGACAAACAAAGATATTTCGCTTATGCGGATTCATCTATGAAATGTCTGGTATGACTTGGAGCGGAAATATTCAGGATCAAGGATGGGCACAGTTCTTTACCTTGGATACTCCAAGAACAACGCAGAATGCTCCTATTATTTCAAGTCCGGGTTATCTAGATATGTACTGGGATGTTAGATTTAATCCTAATGGTAAGGGTACTCTTCCTAATGATCTTACTATGGTTGCTAGTAAAACTTATACTATCGATAATAGTCGATTTGCATTTGTTGGTGTTGGATATAACGGAACCATTTACAAAAGTGATGGTGTTAGTATTTTGGTTTATGACTACAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae0594df5700590107babb0485a8f0f8686c41ef2f50fde6a6f5ca27283f2d1c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50