Protein

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Genbank accession
AIX44190.1 [GenBank]
Protein name
baseplate wedge initiator
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MANQNFRVKKGIEVGLGATFLYADDSGVGINSASPRSNLDVRGRSQTEELLVDNYAEVQGPSTFVGLGTFGGDLFVFNDIKYDEINGRNLNISGISTLGFTSISDIRVSGGSTFLGNVEIDGNLDVTGDLTFDEFDATNANITGIATIGNLLAGVGTITTLSSTDGEITTLTSTDTVVGTLTATDATITTLGVTDSIVGTSTITTLSVTDSVVGTSTITTLNFTDGVGVALTLTDLNVLGEANLNGSGIATAGSDIEFRNLSITGLSTFVGVATFQDDLYVAGNLNVLGDLTYDEVNGRNLNISGIATIGFASITDLRVSGVTTFLGPVNIDGGQQTDFIQTTDLIVTGVATIGYATVTKLIADHSDMRNLNVSGIATIGSLVSDGNGGIIVDGAVSISGIVTIGENSIILDGRKDVEAIYLGDTGRAIVSGITTDGKRTYVKFDDGRFDRLNVSGISTFNDVVSTSSTITNLDVTTATVGFLTATQGYVGVLTVGNLSNGGGGSVIGEDITTRNLSVTGVSTFAGIVTTTGDLYVGGDLFVFNDIFYDEINGRNLNITGVATIGYSSITDVRVAGVATFLGDVNISGVTSVTTLEATGIDAYRVTTQRLIVPDDGFVQLPGIPVSGGSAEFSELLITGISSFVGVATFKDDVYIDGDFIVGGSQVIDNVATENIIISGIATIRTGEITELNVGIATVGFLTATDGYIGVLTAQNYTSLSDERLKSNIETIDDALAGVLRLDGVMFQWNNTGKTDMGVIAQQVEAVFPEIVHGDDTKGVNYNGLIGVLIEAVKELKVENDSLRERLDRLE
Physico‐chemical
properties
protein length:810 AA
molecular weight: 84089,57660 Da
isoelectric point:4,05003
aromaticity:0,06420
hydropathy:0,25259

Domains

Domains [InterPro]
DC_0407
STR
1–116
DC_0407 DC_0407 DC_0407
DC_0407
STR
105–213
DC_0407 DC_0407 IPR036388
IPR030392
CHP
720–806
IPR030392
IPR030392
CHP
720–771
IPR030392 Coil
AIX44190.1
1 810
Architecture
STR
STR 1-806 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX44190.1
1 810
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,9186
Central domain 165 710 547 0,1055
C-terminal 711 810 99 0,9536
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-710
C-terminal
711-810

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Uroviricota > Caudoviricetes > Pantevenvirales > Atlauavirus > Atlauavirus tusconc8
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX44190.1 [NCBI]
Genbank nucleotide accession
KJ019152 [NCBI]
CDS location
range 201167 -> 203599
strand +
CDS
GTGGCGAATCAGAATTTTCGTGTCAAAAAAGGTATAGAAGTTGGCTTAGGTGCCACTTTTCTATACGCAGACGACAGTGGAGTTGGCATTAATAGTGCTAGCCCACGATCAAACCTAGACGTTCGAGGTAGATCCCAAACAGAGGAACTACTGGTAGACAACTATGCAGAGGTGCAAGGACCCTCTACATTCGTTGGACTAGGTACCTTTGGGGGTGACCTCTTTGTATTCAATGATATCAAGTATGATGAGATTAATGGTAGAAACCTAAACATCTCTGGTATCTCCACACTTGGTTTCACTTCTATCTCCGACATCAGAGTATCTGGTGGTTCTACCTTCTTAGGTAATGTAGAGATTGATGGAAACCTAGATGTAACTGGTGACCTAACCTTTGATGAGTTTGATGCCACTAACGCTAACATCACTGGTATTGCCACTATTGGTAACCTACTAGCGGGTGTGGGAACTATCACCACACTATCATCTACTGATGGTGAGATTACAACACTAACCTCTACTGATACTGTTGTTGGTACTCTAACCGCCACTGATGCCACTATCACTACACTAGGTGTTACTGATAGTATAGTTGGAACCTCTACCATTACAACACTCAGTGTTACTGATAGTGTAGTTGGAACTTCTACTATCACAACACTCAACTTCACTGATGGTGTTGGAGTAGCACTCACACTCACTGACCTCAATGTTCTAGGTGAAGCTAACCTCAATGGTTCTGGTATCGCAACCGCTGGTTCTGATATAGAGTTTAGGAACCTCAGTATTACTGGTCTCTCCACCTTTGTTGGTGTAGCAACCTTCCAAGATGACTTGTATGTGGCAGGTAACCTGAATGTATTGGGTGACCTAACCTATGATGAAGTGAATGGTAGAAACCTTAACATCTCTGGTATCGCTACCATTGGTTTCGCCTCTATCACAGACCTAAGAGTATCTGGTGTAACTACCTTCCTCGGTCCTGTTAATATCGATGGTGGTCAGCAAACCGACTTCATTCAAACCACAGACTTGATTGTCACTGGTGTTGCCACTATTGGTTACGCAACTGTCACTAAGTTGATCGCTGATCACAGTGATATGAGGAACCTGAATGTATCAGGTATCGCCACTATTGGTAGTCTCGTATCAGATGGTAATGGTGGAATCATTGTAGATGGTGCTGTATCTATCAGTGGTATTGTTACTATTGGTGAAAACTCTATCATTCTCGATGGTAGAAAGGATGTAGAAGCAATCTACTTGGGTGATACAGGAAGAGCAATCGTCTCTGGTATTACTACTGATGGTAAGAGAACTTATGTCAAATTTGATGATGGTAGATTTGATAGACTAAATGTATCTGGTATCTCTACCTTCAATGATGTAGTATCCACATCATCTACTATCACTAACCTAGATGTAACCACAGCAACTGTTGGTTTCCTAACCGCAACTCAGGGTTATGTTGGAGTTCTAACCGTTGGAAACCTCAGTAATGGTGGTGGCGGTTCTGTTATCGGTGAGGACATTACTACCAGAAACCTCAGTGTAACTGGTGTATCTACCTTCGCAGGTATTGTTACTACTACTGGTGACCTCTATGTAGGTGGTGACCTCTTTGTATTCAATGATATCTTCTATGATGAAATCAATGGTAGAAACCTGAATATCACTGGTGTCGCCACCATCGGTTACTCCTCTATCACTGATGTAAGAGTTGCCGGTGTGGCAACATTCCTAGGTGATGTGAATATCTCTGGTGTTACTTCTGTAACCACACTGGAGGCAACTGGCATTGATGCCTATCGGGTTACTACTCAGAGATTGATCGTACCTGATGATGGTTTCGTACAACTACCTGGTATCCCAGTTAGTGGTGGTTCCGCTGAGTTCTCAGAACTATTAATAACTGGTATATCTAGTTTCGTTGGAGTCGCCACCTTCAAGGATGATGTGTATATCGATGGTGACTTTATTGTTGGTGGATCTCAGGTTATTGATAATGTTGCTACTGAGAACATTATCATCAGTGGTATTGCTACAATAAGAACAGGTGAGATCACTGAACTAAATGTAGGAATTGCTACAGTTGGATTCCTCACAGCCACTGATGGATACATTGGAGTTCTAACAGCTCAGAACTACACTTCACTCTCTGATGAGAGACTCAAGTCTAACATTGAAACTATTGATGATGCTCTAGCGGGTGTTCTCAGACTCGATGGTGTAATGTTCCAGTGGAATAATACTGGCAAAACTGATATGGGTGTTATCGCCCAACAGGTGGAGGCGGTATTCCCCGAGATCGTACATGGGGATGATACAAAGGGAGTCAATTATAACGGTCTTATTGGTGTACTGATCGAAGCAGTCAAGGAACTCAAAGTAGAAAACGATAGTCTCAGAGAGAGACTAGACAGACTGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ced7e951723ec35d684b0e5a0c2d7ac7cf7d381247225469a488a406fcfa123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank