Protein

View in Explore
Genbank accession
ADM79845.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,69
Protein sequence
MPIRIADQNGELHYAAPKIYNGYWRNAVAWVYSGGAWRRTYDPKDENLLINSRLLNGTDYFTYADGRVIGFTPPGWSAYSNAPQVGGNAYAYYSNREDEYSRSYTFKAASSRMFFQTRIYVRQGETYNASAFVHSINLQVGRKSFDIFVDGVPANKQSDYIQMLTQFPTVPDLKANTRVQCVFRALKDCLVQFNIGVGVDYNDSGEIRISQPMISKSSTLLSYQPTPKDTNYNAIILKGTYMKLNKQLPPSAGTNHIESSVQLLDNVSDKIMIVGHNNDISTSGIGVDIKKNTLFVMAENVITHEAAISYKIPLNQVFGAGIWYDVSGGYVKNIRLHANGELIARINETTSVVAATNFVFGSLQYPVDGLIVEQFGLFVNGKNHIFNVEEGDGNISSEVPSTEQLSVSFGSDDTKYEWLGALLPKVTVNPNEEYIATSGMKVELVSSGSNYDTIEWRTQYGSIANSNSNNIEITVADDYDYGLLYHAVYRNRFGSVSTTTTKISAFPTPKRLMSDENGNQMGTEDDKLIENQNP
Physico‐chemical
properties
protein length:534 AA
molecular weight: 59445,67840 Da
isoelectric point:5,41138
aromaticity:0,11236
hydropathy:-0,35375

Domains

Domains [InterPro]
DC_1300
ATT
2–45
DC_1300 DC_0441
ADM79845.1
1 534
Architecture
ATT
STR
ATT 2-45 | STR 214-505 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADM79845.1
1 534
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,0824
Central domain 224 422 200 0,3344
C-terminal 423 534 111 0,3465
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-422
C-terminal
423-534

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage phiAS5
[NCBI] 		879630 Uroviricota > Caudoviricetes > Pantevenvirales > Chrysonvirus > Chrysonvirus as5
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADM79845.1 [NCBI]
Genbank nucleotide accession
HM452126 [NCBI]
CDS location
range 2783 -> 4387
strand +
CDS
ATGCCAATTAGAATTGCGGATCAAAATGGGGAGCTGCATTATGCAGCCCCCAAAATTTACAACGGATATTGGAGAAATGCCGTTGCGTGGGTATATTCTGGTGGCGCATGGCGTCGAACTTATGACCCAAAGGATGAAAACCTTTTAATCAATAGTCGTCTATTGAATGGTACTGATTACTTCACATATGCTGATGGTAGAGTTATTGGATTTACTCCTCCTGGATGGAGTGCATATTCAAACGCCCCTCAAGTCGGGGGAAATGCTTATGCGTATTATTCTAACAGAGAGGATGAATACAGTAGATCATACACATTCAAAGCAGCTAGTAGTCGGATGTTTTTTCAGACTCGAATTTATGTCCGTCAGGGAGAAACGTATAACGCGAGCGCGTTTGTTCATTCAATCAATTTGCAAGTAGGTAGAAAATCGTTTGATATTTTCGTCGATGGTGTCCCAGCTAACAAGCAGAGTGATTATATTCAGATGTTGACACAGTTTCCAACTGTTCCGGATTTGAAAGCAAACACTCGGGTTCAATGTGTATTCAGAGCATTGAAAGACTGCTTGGTACAATTCAATATCGGTGTTGGTGTCGATTATAACGATAGTGGTGAGATTCGTATTAGTCAGCCGATGATCAGCAAGTCTAGCACATTGCTATCATATCAGCCAACTCCTAAAGACACCAACTATAATGCGATCATACTGAAAGGCACATATATGAAGTTGAACAAACAACTTCCTCCATCAGCTGGAACAAATCACATTGAATCGAGTGTTCAGTTGTTGGATAATGTGTCTGATAAAATAATGATCGTTGGACACAACAATGATATTTCTACTTCTGGCATCGGAGTCGATATCAAGAAAAATACTTTGTTTGTTATGGCAGAAAACGTCATTACACACGAAGCCGCGATTTCATATAAAATCCCGTTGAATCAAGTGTTCGGTGCCGGTATTTGGTACGATGTATCTGGTGGATATGTCAAGAATATCAGATTACACGCAAACGGGGAATTGATCGCAAGAATTAACGAGACAACTTCCGTTGTTGCTGCAACCAACTTCGTGTTCGGTAGTTTGCAGTACCCAGTGGATGGGCTCATAGTCGAGCAGTTCGGATTGTTCGTGAATGGAAAGAATCATATTTTCAACGTCGAAGAAGGCGATGGTAATATTTCAAGCGAAGTTCCAAGCACAGAACAATTAAGTGTATCGTTTGGATCAGATGATACAAAATACGAATGGCTAGGCGCATTACTACCTAAAGTCACAGTTAACCCGAATGAGGAATATATTGCAACGTCCGGCATGAAGGTTGAGCTTGTTTCGTCTGGTAGTAATTATGACACGATAGAATGGAGAACTCAATATGGATCAATTGCTAACTCGAATTCGAATAACATCGAAATTACAGTAGCAGACGATTACGATTATGGATTGCTTTATCATGCCGTATATCGAAATCGTTTCGGTTCAGTGAGCACAACAACAACAAAAATCTCCGCATTCCCAACTCCGAAGAGACTTATGTCCGACGAGAATGGCAATCAGATGGGTACTGAGGACGATAAGTTAATCGAAAACCAAAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3374ba899bc0e73fecee8a29b1b4921e3291433e0519a842a2d6793d36773ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence and characterization of a broad-host range T4-like bacteriophage phiAS5 infecting Aeromonas salmonicida subsp. salmonicida Kim,J.H., Son,J.S., Choi,Y.J., Choresca,C.H. Jr., Shin,S.P., Han,J.E., Jun,J.W. and Park,S.C. 2012 22226819 GenBank
Complete genome sequence of bacteriophage phiAS4 and phiAS5 infecting Aeromonas salmonicida Kim,J.H., Son,J.S., Choi,Y.J., Kim,K.S. and Park,S.C. 2011-11-25 — GenBank