Protein

View in Explore
Genbank accession
AND75835.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGSLSVGIAISPAGLATLTSTEERSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGNEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYYTNEGFETTDPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53048,23470 Da
isoelectric point:5,38614
aromaticity:0,06890
hydropathy:-0,21496

Domains

Domains [InterPro]
DC_0176
STR
1–421
DC_0176
SSF69349
STR
248–333
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
251–309
IPR015173 SSF88874
AND75835.1
1 508
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage WG01
[NCBI] 		1837931 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75835.1 [NCBI]
Genbank nucleotide accession
KU878968.1 [NCBI]
CDS location
range 88981 -> 90507
strand +
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCAACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCTACAGAAACGTCCCAAGGCATTATTCGTCTTGCCACAACACAAGAAGTAATGGATGGTCTGGATGCTTATAGTGCAGTGACACCGGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTATGCTACTAACGCTGAAGCTATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACTTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCCGCATTAGCTGGTACCGATGATACCACAGCAATGACCCCACTTAAAGTATCTCAGGCAATTGGTGCAGCGACGGCCGCGTTACCGGTTTATTCTACAGCAACGACTACAAATGAAGGTTTAGTTCGTTTAGCGACCAATGCAGAGGTTGGTAATGGAAGTCTTTCGGTAGGTATCGCTATTTCTCCGGCAGGATTAGCCACATTAACTTCCACCGAAGAACGAAGCGGTATTATTAAACTCGCAGGTTGGGATATGGTATCTAATGGTACCGACCATACCGCCGCAGTTACACCGGCTTCTTTGTTAGCTCGTACAGGTAATACTGGACGTATTGGGTTGGTTCGTTTATCTACTACTGTAGGCCAAGGCGATGGTAATACGGCGCTGGCTTATAATGCTAACGTTATTTCTACTTCAGGCGGCGAAATATGGGGTACTTTAAACGTTAATGGAGCATTACGTCGTAATGGTGTTGATGTTGTTACCCATGACCAATTATCAGATAGCGTTCCGGTGGGTACTATTTGCATGTGGGGTGGCAATGAAGGTAATATACCTGGTAAATGGCGTGCTTGTGTAGGTGGGACTTACACTGGTGGTGCATATTTAAATGCTGTTGGTGGGCGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTCGGTGGATATTCTGAAGGCGAAGTTAACCCGCATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAATGGTGTTGGTTCTTTCCCGCAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACATGATAACTATGGCGCTTTTGGTAACACCGCTAACTCCGGATATGTTGGTACTCGTAAAGGCCTTGACTGGGATAACCGTAGTTATTATACCAACGAAGGTTTTGAGACCACCGATCCTTGGAACCGTGATGGACATACCACATTGAATAGTGAAGGTCTTATTGCCAACGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb1874e5b4f1bd7c9affcfac2f59c0fbbdfdf459f50435e8a675e6c96f697a13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of T4 like phage of avian pathogenic Escherichia coli Xu,J., Chen,M. and Zhang,W. 2016-05 — GenBank