Protein

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Genbank accession
AND75212.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSQRIGTTIAPLVSGKVPDQYIRTNILFSNLAQFPTTGSLNVLYIDTLTRKMYVWASGGYKDISPTVELSGISLSTDNVAQGSNPDRQYLTADLKANYDSKLSNITSTGSGKSVHLVSKTGANAFVRGLDSDSSISITDRGDSLVLNTNYYKFVAKYNGTVKLDSKTELLKAIDENDIVTLEGDVFAYAYKEAGDVKLIDFYNTWNVKAVVATTGTSTPIASPTNLVISSNGLVVSGSGTASTTAEIYSDTNQLLGSATTISDGTFTITFGSPELTGRRLKAYTVTPEGNRSKPTYFFSNNTTSIKAIDCISISSDGLKLRGNTSRASTVKVFNSSNTELGSATANDYGNFTVTLSSAVHTGDTVRIEATLGTTLTASVPSYLVTIKDIQAPYDIEYNLDRTVFTGKAEPLSTITFSTTAISINAVTKADGSFAIYSFANPIAGSGDLAVEVKQETRTNGILLKLNQLDAKVADDPVVKDAIGTHSTSFLNKTVTPILGTAGNATFDVLLDSMIKDIELVGTSPTGKELVWEANLKIIKKNIGE
Physico‐chemical
properties
protein length:544 AA
molecular weight: 57897,21370 Da
isoelectric point:5,38216
aromaticity:0,07537
hydropathy:-0,08824

Domains

Domains [InterPro]
IPR041498
STR
220–297
IPR041498 IPR041498
IPR041498
STR
222–297
IPR041498
AND75212.1
1 544
Architecture
STR
STR
STR 220-297 | STR 311-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AND75212.1
1 544
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,8763
Central domain 133 533 402 0,2093
C-terminal 534 544 10 0,6841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-533
C-terminal
534-544

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_ME3
[NCBI] 		1837876 Uroviricota > Caudoviricetes > Metrivirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75212.1 [NCBI]
Genbank nucleotide accession
KU935715 [NCBI]
CDS location
range 60510 -> 62144
strand +
CDS
TTGAGTCAACGAATTGGAACAACAATTGCTCCTCTTGTAAGTGGAAAAGTTCCAGATCAATATATAAGAACAAATATCTTATTTAGTAATTTAGCTCAGTTTCCTACTACTGGTTCACTAAATGTATTATACATTGATACATTAACTAGAAAGATGTATGTATGGGCTTCTGGTGGATATAAAGATATTTCTCCTACTGTTGAGTTAAGTGGTATATCTTTAAGTACAGATAATGTTGCACAAGGCTCTAATCCAGATAGACAGTATTTAACAGCTGATCTTAAAGCAAACTATGACTCTAAGCTCTCCAATATCACTTCAACAGGTAGTGGAAAATCTGTACACTTAGTATCTAAAACAGGTGCTAATGCTTTTGTTCGAGGTCTAGATTCAGATAGTAGTATAAGTATTACTGATAGAGGAGACAGTTTAGTTCTTAATACAAATTATTATAAGTTTGTAGCAAAATACAATGGAACAGTAAAATTAGATTCTAAGACTGAACTCTTAAAAGCTATAGATGAAAATGATATAGTTACATTAGAGGGTGACGTATTTGCATATGCTTATAAAGAAGCTGGGGATGTTAAATTAATTGATTTCTATAATACATGGAATGTTAAAGCTGTAGTAGCTACTACGGGTACATCAACTCCAATAGCTTCTCCTACAAACCTAGTTATTTCTTCAAATGGACTTGTTGTGAGTGGGTCAGGGACTGCTTCTACTACAGCTGAAATTTATAGTGATACAAATCAATTACTAGGTTCAGCAACAACAATTTCTGATGGTACTTTTACAATTACTTTTGGATCTCCTGAGTTAACAGGTAGAAGATTAAAAGCATACACAGTTACACCAGAAGGGAATAGATCTAAACCTACTTACTTTTTCTCTAATAATACAACATCTATTAAGGCGATAGATTGTATTTCAATTAGTTCAGATGGGCTAAAATTAAGAGGAAATACATCTAGAGCAAGTACAGTAAAAGTGTTTAACAGTAGTAATACAGAGCTAGGTTCAGCAACTGCAAATGATTATGGAAACTTTACAGTTACTTTATCCTCTGCTGTACATACTGGAGATACAGTCAGAATAGAAGCTACATTAGGTACTACATTAACAGCAAGTGTTCCTTCATATTTAGTAACTATTAAAGATATTCAAGCACCTTATGACATTGAGTACAACTTAGATAGAACTGTATTTACAGGTAAAGCAGAACCATTAAGTACAATTACATTCTCTACAACAGCAATAAGTATAAATGCAGTTACTAAAGCTGATGGATCGTTTGCAATTTATTCTTTTGCAAACCCAATTGCAGGTAGTGGAGATTTAGCTGTAGAAGTTAAACAAGAAACTAGAACAAATGGGATTCTATTAAAGTTAAATCAATTAGACGCTAAAGTAGCAGATGATCCAGTAGTAAAAGATGCTATTGGAACACACTCTACATCTTTCCTCAATAAAACTGTAACACCAATACTAGGTACAGCTGGAAATGCAACATTTGACGTGTTATTGGATTCAATGATTAAGGATATTGAATTAGTAGGTACTAGTCCAACAGGTAAAGAACTTGTATGGGAAGCTAATCTTAAAATCATTAAGAAAAATATAGGAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
086dfdde4f784299b380792e28f58223ca8cd6040b6cb4081b9b5b436b457ae6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Jumbo Phage vB_AbaM_ME3 of Acinetobacter baumanni Buttimer,C., O'Sullivan,L., Elbreki,M., Neve,H., McAuliffe,O., Ross,R.P., Hill,C., O'Mahony,J. and Coffey,A. 2016 27563033 GenBank