Protein

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Genbank accession
QIG68270.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLIPAAEYAPDVADLNSAFSDAIQNVLCASGGYIPAPALSALTAALGARPLGWLSVRSLDGSIRFFAGTATKLYLLNNSNLTWSDVSKPATTYSATIDVPWHMKAFGNFVIAVNKNNDPQVYEIGVDVLFGDLGGSPPRAGRIAIWGDFVALLDLVSNPNRVQWSGLNNCEFWTPGSNNSDYQDFADGGRVTGSTDVTNPIIFLESAIQRATFVPGSAEIFTFQKVQETRGAKSPLSVATRGSYAFFADAGGFFQASADGSVAPIGFEKVDRTVFGKISVYGTSKIMGAIDPFYSRVYWAVDTNDDNTYEEMYVYDWQLERWTMVQISAIGIFPFATSGYTLDGLDAVSTSLDALPFSLDSKVWDGGAPVLVAFTSDYKIGAFSGANLEATVTTQELGDTAGSVQRVTENTPVVDTLTTYVSVGLRMRRSDNVTWLDEQQPSSNTGIVRKRARARFLRFKTRLPSGTVWHHFKGIDVPTTPAGLR
Physico‐chemical
properties
protein length:485 AA
molecular weight: 52517,29650 Da
isoelectric point:4,94570
aromaticity:0,11546
hydropathy:-0,03959

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG68270.1
1 485
Domain Start End Length (AA) Confidence
N-terminal 1 357 357 0,8328
Central domain 358 474 118 0,1181
C-terminal 475 485 10 0,9872
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-357
Central
358-474
C-terminal
475-485

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y1_10
[NCBI] 		2509570 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68270.1 [NCBI]
Genbank nucleotide accession
MN988487 [NCBI]
CDS location
range 35548 -> 37005
strand +
CDS
ATGCTCATTCCAGCAGCGGAATACGCCCCTGATGTGGCTGATCTCAACTCGGCCTTCAGCGATGCGATCCAGAACGTCCTTTGCGCCAGTGGCGGCTATATCCCGGCGCCTGCTCTGTCGGCCCTTACCGCTGCCCTCGGCGCTCGGCCTTTGGGCTGGCTGTCTGTCAGAAGTCTTGACGGGTCTATCCGATTCTTTGCCGGTACCGCGACCAAGCTTTACCTGCTGAACAACAGCAACTTGACGTGGTCAGACGTTTCGAAGCCCGCGACGACGTACAGCGCCACCATTGATGTTCCTTGGCACATGAAGGCCTTCGGCAACTTCGTCATTGCCGTCAACAAGAACAATGACCCGCAGGTTTATGAGATCGGGGTTGATGTTCTTTTCGGTGATTTGGGCGGTTCCCCGCCGCGGGCCGGACGCATTGCGATCTGGGGTGATTTCGTTGCCCTTCTGGACCTTGTCAGCAACCCGAACCGCGTCCAGTGGTCTGGTTTGAACAATTGCGAATTCTGGACGCCTGGCTCAAATAACAGCGACTATCAGGATTTTGCCGATGGCGGCCGAGTCACCGGATCCACTGATGTAACGAACCCGATCATCTTCCTCGAAAGCGCCATTCAGCGCGCTACCTTCGTTCCCGGCTCTGCCGAAATCTTCACCTTCCAGAAGGTTCAGGAGACCAGGGGGGCAAAATCTCCTCTTTCGGTGGCGACCCGCGGCTCTTATGCCTTCTTTGCAGACGCCGGCGGCTTTTTTCAGGCATCGGCTGACGGATCGGTGGCGCCGATCGGGTTTGAAAAGGTTGATAGGACGGTTTTCGGAAAGATTTCCGTCTACGGCACGTCGAAAATCATGGGCGCGATCGACCCGTTTTATAGCCGCGTCTATTGGGCCGTCGATACCAATGACGACAACACCTATGAGGAGATGTACGTCTACGATTGGCAGCTTGAACGCTGGACAATGGTCCAGATCAGCGCCATCGGCATCTTCCCGTTTGCCACATCAGGGTACACGCTGGATGGCCTCGATGCGGTCAGCACCAGCCTTGATGCATTGCCGTTCTCCCTTGACAGCAAGGTCTGGGATGGCGGCGCGCCCGTTCTCGTGGCCTTCACGTCGGATTACAAGATCGGCGCATTTTCTGGTGCGAACCTCGAGGCGACAGTGACAACGCAGGAATTGGGCGACACGGCCGGCAGCGTTCAGCGCGTGACCGAGAATACGCCGGTGGTGGACACATTGACTACCTATGTCTCTGTCGGCCTTCGCATGAGGCGCAGCGACAATGTGACCTGGCTAGACGAGCAGCAGCCGTCGTCGAATACCGGCATTGTTCGGAAGCGGGCCAGGGCAAGGTTTTTGCGGTTTAAGACAAGATTGCCGAGCGGAACCGTCTGGCATCATTTCAAAGGCATTGACGTTCCAACAACCCCGGCGGGCTTGCGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c07b67c7ba7b256440273b9b1a488097bc2a98e5fd28422df341aae9b4373b0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank