Protein

View in Explore
Genbank accession
QBX25687.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MDLLNFTFLKIGINEVANKKISAEWEGTDTKLNRLLSLAKKFGAEIEFDTRLNADSSIKSFTVNVYHEHDDSHQGVGQISPKILKYGKNLKTITRTIDKTGIYNTVVPTGKDEHGNVIGISGLGPWSVNNAKGEREFYQSGAALYAPLSMQMYPSTFTHSTGDRDQWTRKDMTVESSNPEVIRSAAYRELKKNCYPAVTYEAEGFADLEIGDTVKVYDDGFNPTLLLEMRVSEQVISFTNPKNNKTTFSNAKALENRLSQGIQQQLDRMIEDAKPYTIKLATDNGIAFKNGQGQTIVTPALMRGNKVINSGWRWVVDGVIKATSPSYIVRASDISQKMVLTVSAWIDNKEVASEQLTLINTSDGLQGQKGDTGPKGDPGPQGAIGPKGERGEKGEKGDRGERGLQGLQGLQGVKGDQGIPGPKGADGRTQYTHIAYADTISGSGFSQTNADKAYIGVYVDFNSTDSINPADYRWNKWKGPDGKNGKDGPQGIPGKPGADGRTPYFHRAWANSADGRDGFSTTDSTNKRYLGTLTDFTEADSQNPASYKWTALFGTTEQSGNILLDSNAGWRNKHQQDFILAEPLKAGKQYTLSARWWRSDNSTLSFGIRENPSDSWQWISLAYSFELDVWSATFTSNKNLNAGDTVSFFTVELEGTGNADWAVLTVGAIPMTSWQPHWSETQKQLDSKADQGLTQEQLNALNEKAGIIQAELEAKASADTLDNWIKAYKDFVKSNETARAQAEKDLISASQRVSNIAKDLGELSDRWNFIDTYMSSSNEGLVIGKNDGSSSMMFNPNGRISMFSAGVEVMYISQGVIHIENGIFSKTIQIGRFREEQYHINPDMNVIRYVG
Physico‐chemical
properties
protein length:851 AA
molecular weight: 93760,12190 Da
isoelectric point:5,68818
aromaticity:0,09166
hydropathy:-0,59542

Domains

Domains [InterPro]
DC_0255
STR
1–851
DC_0255
IPR010572
ENZ
18–252
IPR010572 IPR050149
IPR007119
Unmapped
20–248
IPR007119 IPR008160
QBX25687.1
1 851
Architecture
STR
STR 1-851
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan268
[NCBI] 		2548083 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus infantis SK970
[NCBI] 		1035189 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus infantis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25687.1 [NCBI]
Genbank nucleotide accession
MK448892.1 [NCBI]
CDS location
range 28063 -> 30618
strand +
CDS
ATGGATTTGCTCAACTTTACTTTCTTAAAAATCGGTATCAATGAGGTTGCTAATAAGAAAATCTCTGCTGAATGGGAGGGCACAGACACCAAACTCAATAGACTACTTAGTCTAGCTAAGAAATTTGGCGCAGAAATTGAGTTTGATACACGTCTCAACGCTGACAGCTCTATCAAGTCATTTACAGTCAATGTCTATCATGAGCACGACGATAGCCACCAAGGGGTAGGTCAAATTAGCCCAAAAATCTTGAAGTATGGGAAAAACCTCAAGACGATTACTAGGACGATTGACAAAACTGGAATCTATAACACGGTTGTCCCAACAGGTAAGGACGAACACGGCAATGTTATTGGCATCAGCGGACTTGGGCCTTGGTCAGTCAACAATGCAAAGGGAGAACGTGAGTTCTACCAGTCAGGGGCTGCACTATATGCCCCTCTCTCAATGCAGATGTATCCGTCTACTTTTACTCACTCAACAGGTGACCGTGACCAGTGGACAAGAAAGGACATGACTGTAGAGAGTTCAAATCCTGAGGTCATCCGATCAGCAGCCTACCGTGAACTGAAAAAGAACTGTTACCCAGCAGTCACTTATGAGGCTGAGGGCTTTGCAGATTTGGAGATAGGAGACACAGTCAAAGTCTATGATGACGGCTTTAACCCTACTCTCTTGCTTGAGATGAGGGTATCTGAGCAAGTCATCAGTTTTACCAATCCGAAGAATAACAAGACCACTTTCTCAAATGCTAAGGCGCTTGAAAATCGCCTATCTCAGGGTATTCAGCAACAGCTAGACCGAATGATAGAAGACGCTAAGCCCTACACTATCAAGCTAGCTACAGACAACGGCATAGCCTTTAAGAATGGTCAAGGCCAGACCATTGTGACCCCTGCCCTTATGCGAGGGAACAAGGTCATCAATAGTGGATGGCGCTGGGTGGTGGATGGTGTAATCAAAGCTACAAGTCCTAGTTACATTGTCCGAGCCTCTGACATCAGCCAAAAGATGGTTTTGACAGTCTCAGCGTGGATTGATAACAAAGAGGTAGCCTCTGAGCAGCTGACTCTTATCAATACGTCTGACGGTCTCCAAGGCCAAAAAGGTGACACAGGACCGAAAGGTGACCCTGGACCACAGGGAGCAATAGGTCCCAAAGGTGAAAGAGGAGAAAAAGGCGAAAAGGGAGACCGTGGAGAACGTGGTTTACAAGGACTCCAAGGCTTGCAAGGCGTAAAGGGTGACCAAGGTATCCCTGGACCTAAAGGAGCTGACGGTCGTACACAATACACTCACATTGCCTACGCCGATACTATCTCAGGTAGTGGATTTAGCCAAACTAACGCTGACAAGGCCTATATAGGGGTCTATGTTGATTTCAACTCAACTGACAGCATCAATCCTGCTGACTATCGCTGGAACAAGTGGAAAGGGCCAGATGGCAAGAACGGTAAGGACGGCCCTCAAGGTATTCCAGGTAAGCCTGGAGCAGATGGACGGACTCCATACTTTCACCGAGCCTGGGCTAACTCCGCTGACGGTCGTGATGGTTTCAGTACAACTGATAGCACAAATAAGCGCTATTTAGGGACGCTAACGGATTTCACTGAGGCGGATAGTCAGAATCCTGCAAGCTATAAGTGGACAGCTTTATTTGGGACAACAGAGCAATCAGGAAACATTTTACTTGATTCAAATGCTGGATGGAGAAATAAACATCAGCAAGACTTCATCTTGGCTGAACCCTTAAAAGCAGGCAAGCAGTACACATTAAGCGCTAGGTGGTGGAGGAGTGATAACAGCACGCTTAGCTTTGGGATTCGTGAAAATCCTAGCGATAGCTGGCAGTGGATAAGTCTAGCATATAGCTTTGAGTTGGATGTTTGGAGTGCAACTTTTACCTCTAATAAAAATCTCAATGCTGGTGACACTGTTTCATTCTTCACTGTAGAACTTGAGGGGACTGGTAATGCTGATTGGGCTGTTTTAACAGTTGGAGCTATACCAATGACGAGCTGGCAACCTCACTGGTCAGAGACTCAAAAGCAGTTGGATTCTAAAGCCGATCAAGGGCTAACTCAAGAACAACTCAACGCTCTAAATGAGAAAGCTGGAATTATTCAGGCTGAGCTTGAGGCTAAAGCTAGCGCTGACACACTTGATAACTGGATAAAGGCTTATAAGGACTTTGTCAAGTCCAATGAGACAGCTAGAGCACAAGCTGAGAAAGATTTGATTTCAGCTAGTCAGCGTGTTTCTAATATCGCTAAGGACCTTGGGGAACTGTCTGACCGTTGGAATTTCATTGATACCTATATGAGTTCCTCAAATGAGGGTCTAGTCATCGGTAAGAATGACGGGAGCTCTAGCATGATGTTTAACCCTAACGGACGAATTTCAATGTTTAGCGCTGGTGTAGAGGTTATGTATATTTCTCAAGGTGTTATACACATTGAGAACGGTATCTTCTCCAAAACTATCCAAATTGGACGATTTAGAGAAGAGCAGTATCATATTAACCCTGACATGAACGTCATCCGTTACGTTGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9318b95e639ebbd328f09c12b79883f8b9654dce79646e09c4c489e81dd6b87a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank