Protein

View in Explore
Genbank accession
APU88904.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATYLLHELGCWSDVAYGMSFGNILGIENQTGFEIDIRNIIVTPTMGYDSTTNMKPQQLYRITASAAGQTVTALKNDTGSASLPAQVTAYAHGSVTTSGVLRQFGVLFGQRVTQGATPVAFVSRSPGMLAQTQCFLKTADQRVVLREGEGFAWVQDAAPIRRTQEGIFTVRNASSGATYTFRVPNTPAAEQDIMFALFNGAGSGVVLELVAAEICDIGMQGYSDGAPWQNELGNPVPGWRVVRCRSILHGDVCTPIKYDTASDDVPSGVICSRGGCVVLDHAAPMRAEAYSSIYLSSPYAGQKLLDQQHLGLIRGGPLDTLEQWSVSSTDFPFRMEGATRELVTTRTPLTHKGLVVHTDEAIALVHWYASKDSDGSAYGSPTYTEAPNTGAKYNVQIEFNVNVGEGVTTNYAPTNVGLYIS
Physico‐chemical
properties
protein length:421 AA
molecular weight: 45220,33120 Da
isoelectric point:5,29020
aromaticity:0,08789
hydropathy:-0,08741

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU88904.1
1 421
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0014
Central domain 11 209 200 0,0130
C-terminal 210 421 211 0,9634
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-421

Taxonomy

  Name Taxonomy ID Lineage
Phage Virus Rctr197k
[NCBI] 		1924548 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU88904.1 [NCBI]
Genbank nucleotide accession
KX853510 [NCBI]
CDS location
range 92959 -> 94224
strand +
CDS
ATGGCGACGTATCTACTGCATGAGCTTGGTTGTTGGTCTGACGTGGCCTACGGCATGTCGTTCGGCAACATCCTCGGGATCGAGAACCAGACCGGCTTCGAGATCGACATCCGAAACATCATTGTAACACCGACGATGGGCTACGACTCAACGACGAACATGAAACCACAGCAGCTCTATCGCATCACCGCGTCGGCCGCAGGGCAGACAGTCACGGCTCTCAAGAACGATACGGGGTCGGCTTCTCTCCCAGCGCAGGTGACCGCGTACGCGCACGGTTCGGTTACGACGTCTGGGGTCCTGCGCCAGTTCGGAGTGCTTTTCGGACAGCGGGTCACTCAGGGAGCGACACCCGTCGCGTTCGTATCGCGGTCGCCAGGGATGCTCGCGCAAACACAGTGCTTCCTGAAGACCGCCGACCAGCGTGTGGTCCTTCGGGAGGGGGAAGGTTTCGCGTGGGTCCAGGACGCAGCGCCGATACGACGCACACAGGAAGGCATCTTCACGGTACGGAACGCCTCGAGCGGCGCGACGTACACCTTCCGTGTACCGAACACTCCGGCGGCGGAGCAAGACATCATGTTCGCACTCTTCAATGGAGCGGGGAGCGGGGTCGTGCTGGAGCTCGTCGCAGCAGAGATCTGCGACATCGGGATGCAAGGCTACTCGGATGGAGCTCCGTGGCAAAACGAGCTCGGCAATCCCGTCCCGGGTTGGCGGGTCGTTCGATGCCGGAGCATCCTCCACGGTGATGTATGTACCCCAATCAAGTACGACACAGCGTCCGATGACGTACCAAGCGGCGTCATCTGCTCGCGGGGCGGTTGTGTGGTCCTCGACCACGCAGCGCCGATGCGCGCGGAGGCGTACAGCTCAATCTATCTGTCATCCCCGTACGCAGGACAGAAGTTGCTCGACCAGCAGCACCTCGGCCTCATCCGGGGCGGACCACTCGACACATTGGAGCAGTGGTCAGTGTCGAGCACCGACTTTCCGTTCCGTATGGAGGGAGCGACGCGTGAGCTCGTCACGACGCGGACACCTCTCACGCACAAGGGGCTGGTTGTCCACACCGACGAAGCCATCGCGCTCGTGCACTGGTACGCGAGTAAAGACTCGGACGGTTCGGCATACGGTTCACCGACGTACACAGAAGCGCCCAACACTGGAGCCAAGTACAACGTCCAGATCGAGTTCAACGTCAACGTCGGTGAGGGTGTCACGACGAACTACGCGCCGACGAACGTCGGGCTCTACATTTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f0818df82181b1dbdf2b0c46d1381a54b239652513141b96a07ebc7ce9db3a9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50