Protein

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Genbank accession
AUR93114.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVSMIGPKFYAWDRNGKPLAFGKLYTYQARTNTPKPTYQSEDQVVENTNPVILNGEGYANVYLDGAYKMVLKDKDENEIWSSDPVTSASAEEWVNCLSAQYVNPLSFKVTGNETISFSQGRRVRLDSNSPEYGYATVLSSSYAGGETTVNIYEGSDLVTTGLSEVCTSIVSAQSIPVYGQPFSIFSSVGDLISPSMDRVTPNMIDAGDVMVKTTAYYGGWAVSKVPLGGAGYILSTIQRVRDTKQDQSWEPDGYSSHYLFGGTDYVAIIPGNKVTIEQCGAVADWSGSTSTSTDNAESFKSALNNFADVTNESTDNWYYCSETLNIKKSVYFHGLLVMGAGVDRPLRIKFADDAVGIIVHRGDTNASSKGVPVIETTTTAGDGTVLEAIQATQATSPIVGNESEDIGLHGIWTKARTTIRNCRFERFRGNGLHVVASGSSSDPYIRGNANSTEVINSVFWYSSGHGHYTDGADVNACHYQQLSCYHNNKHGSFDSSFLGNNYTMCNLGLNNKADNGYVDVKGDNLNARSVYTDTYLELSDVAYVELAGRSILVGGNIDRYRVTGAAYMYAVSGLLRMGNGLQCEQKTTSEIIVNSGVGGSVDTGEIQWWQSQNDGNVWRFQWDTANFTDMRLRYANLNTCYTITGKNTTIDFGTASPKPYQFHQPNIAFGTSDEGRRMFYLSILPTSGEFAKGDIIWTRSANAGGKAGWYCTTGGTAGSTAVFKTMAAIDA
Physico‐chemical
properties
protein length:732 AA
molecular weight: 79549,13900 Da
isoelectric point:5,09132
aromaticity:0,10792
hydropathy:-0,32186

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93114.1
1 732
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9846
Central domain 99 581 484 0,7795
C-terminal 582 732 150 0,9408
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-581
C-terminal
582-732

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.183.O._10N.286.48.B7
[NCBI] 		1881391 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93114.1 [NCBI]
Genbank nucleotide accession
MG592549.1 [NCBI]
CDS location
range 21520 -> 23718
strand +
CDS
ATGGCAGTATCAATGATCGGACCTAAATTTTATGCCTGGGACCGAAACGGCAAACCGCTGGCCTTCGGTAAATTATACACTTACCAGGCTCGAACAAACACACCAAAGCCAACGTATCAGTCAGAAGATCAGGTGGTTGAAAACACCAATCCGGTCATCTTGAACGGTGAGGGTTACGCTAACGTTTATCTTGATGGCGCATATAAGATGGTGCTTAAAGATAAAGATGAAAATGAAATATGGTCATCAGACCCGGTAACATCAGCAAGTGCTGAAGAGTGGGTTAACTGCTTATCAGCCCAGTACGTTAATCCGTTAAGCTTTAAAGTTACTGGAAATGAAACCATTTCATTTAGCCAAGGGAGAAGAGTTAGGCTTGACAGCAATTCACCTGAATATGGGTACGCAACTGTTTTATCATCATCATACGCTGGTGGAGAAACAACGGTAAATATATATGAAGGTTCTGATCTTGTTACTACCGGTCTTTCAGAGGTTTGCACTTCAATAGTAAGCGCTCAATCAATCCCTGTTTATGGTCAACCGTTTTCTATTTTTAGTAGTGTTGGTGATCTTATTTCCCCGTCAATGGATAGGGTTACTCCTAATATGATTGATGCTGGTGATGTGATGGTTAAAACAACGGCTTATTATGGAGGGTGGGCGGTTTCTAAAGTTCCTCTTGGTGGCGCTGGTTATATATTATCAACAATACAAAGAGTTAGAGATACCAAGCAAGATCAATCGTGGGAGCCTGATGGATATTCAAGCCATTACCTTTTTGGTGGCACTGATTATGTCGCAATAATACCTGGCAACAAAGTAACTATTGAACAGTGTGGAGCTGTAGCTGATTGGTCTGGTTCTACTTCTACGTCTACGGATAACGCTGAATCATTTAAGTCTGCACTGAATAATTTTGCAGATGTAACGAACGAATCCACAGACAACTGGTATTACTGCTCTGAGACGTTAAACATCAAAAAATCTGTTTACTTCCACGGTCTATTAGTGATGGGCGCTGGCGTTGATAGACCGCTAAGAATTAAATTTGCTGATGATGCTGTAGGAATTATCGTCCATCGAGGTGACACAAACGCATCAAGCAAAGGCGTGCCAGTGATTGAGACTACAACAACCGCCGGAGACGGAACAGTTCTTGAGGCTATACAAGCAACTCAAGCTACAAGCCCTATAGTCGGTAATGAATCAGAAGACATCGGCTTGCATGGTATATGGACAAAGGCTAGAACAACTATAAGAAACTGTCGCTTTGAGAGGTTCAGAGGTAATGGGTTGCATGTTGTTGCTAGCGGTTCATCATCAGACCCTTACATAAGAGGTAACGCTAACTCCACAGAGGTGATCAACTCTGTGTTTTGGTACAGTTCCGGTCATGGACACTACACAGACGGAGCTGACGTTAACGCATGTCATTACCAGCAGTTATCTTGTTATCACAACAATAAACATGGTTCTTTTGACTCATCGTTCCTTGGAAATAATTACACAATGTGTAATCTTGGATTAAACAATAAAGCAGACAATGGTTATGTTGACGTTAAGGGTGACAACTTAAATGCTCGTTCTGTTTACACTGACACCTATCTTGAGTTGAGTGATGTTGCTTACGTCGAGTTAGCAGGCAGATCTATTCTTGTTGGTGGCAATATAGACAGATACCGGGTCACAGGTGCAGCATACATGTATGCAGTTAGCGGGCTACTTAGAATGGGCAACGGCTTGCAATGCGAGCAAAAGACAACAAGTGAAATTATCGTTAACTCAGGTGTTGGCGGTAGCGTGGACACCGGCGAAATTCAGTGGTGGCAATCTCAAAATGATGGCAACGTATGGCGGTTCCAGTGGGACACGGCAAATTTCACCGACATGAGGTTGAGGTATGCAAACCTGAATACTTGCTACACAATCACTGGTAAAAATACGACTATTGACTTCGGCACGGCATCACCAAAACCTTATCAATTCCATCAGCCAAATATAGCATTTGGAACATCAGATGAAGGAAGACGAATGTTTTACCTTTCAATTTTGCCAACAAGCGGTGAATTTGCGAAAGGTGATATAATCTGGACTCGATCCGCTAACGCTGGTGGAAAAGCAGGGTGGTATTGCACAACTGGTGGTACAGCAGGAAGCACAGCAGTATTTAAAACCATGGCAGCAATTGACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42ce4efddc7d1e15ecb38d3c7fe76c9b1cbbf85c644f6ebdcc07ee2a6754149b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6517
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank