Protein

View in Explore
Genbank accession
UYE96980.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MPANFKKFDVKHGISVNGLPFVDENRNVTLNNLTVQGTSTVVDTRTVSQTDPIISIGSAGSTYAAASVTTGTPGRIFFSAEAFDDFALSDSVKFETTGTAPTGLVSGTTYYVKAKDTDVTSSTYRSITLSATQGGSAIPLTSTGAGTLNFTLNPLRDLGQDLGIEFNYVDSTAKKGFFGFDDSTGHFTFLKDTTYAGHDTTSDDGSPAPAFTGTKSGAEFSYAKLEPTSALTSTAAALDIDQTWNGGSNNFKAIEVDITDTASAAASSLLDISVGNDQKLLLRKDGVLSLNTTDQTGVLTLVQDADTQSTTLNLIDGTATWNAAGSTFVGLDLSFTQTAYAAGSQLLSISASANRNFIIDAEGEIVSRSEFTGGGLQTALLVDVTDTSSAANSLLLDLQVGDSSKFSVDKDGDVTAQGGLTIEGDFTANGSGRFDDRVIIQSQINNSGAYADSTEFRSDTSTINAGSSVATTFTSFFKANFSTAKLLVQVKQGTNVHATELLLVHDGTDVYMTEYGTVYNSDILVTFDAVVSGNDIVVQATNTSASVTANAHTTIKSLTTGINA
Physico‐chemical
properties
protein length:564 AA
molecular weight: 58783,63570 Da
isoelectric point:4,31478
aromaticity:0,07979
hydropathy:-0,07482

Domains

Domains [InterPro]
DC_1607
STR
12–353
DC_1607 IPR027412
DC_1556
RBD
288–564
DC_1556
UYE96980.1
1 564
Architecture
STR
RBD
STR 12-353 | RBD 354-564
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM61
[NCBI] 		2969441 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE96980.1 [NCBI]
Genbank nucleotide accession
OP053361.1 [NCBI]
CDS location
range 13527 -> 15221
strand -
CDS
ATGCCAGCTAACTTTAAGAAGTTCGACGTAAAACATGGGATTAGCGTAAATGGCCTCCCGTTCGTCGACGAAAACCGCAATGTAACTCTTAACAACCTTACAGTACAGGGTACTTCGACGGTTGTTGATACGAGAACAGTATCCCAGACAGATCCAATTATCTCCATTGGTAGTGCAGGATCTACTTATGCAGCCGCCTCGGTAACCACCGGGACACCTGGTAGAATTTTCTTTAGTGCAGAAGCTTTTGATGATTTTGCACTCAGTGACTCTGTTAAATTTGAGACGACAGGAACTGCACCAACTGGTTTGGTTAGTGGAACTACTTACTACGTCAAAGCTAAAGATACCGACGTAACAAGCTCTACGTACAGAAGCATAACTCTTTCGGCCACCCAAGGCGGATCTGCGATTCCTCTTACTTCAACAGGCGCTGGCACTCTTAACTTTACATTAAATCCTCTTCGTGATTTAGGACAAGATCTTGGTATCGAGTTTAACTACGTAGATTCTACTGCCAAGAAGGGTTTCTTCGGTTTCGATGATAGCACTGGTCACTTTACCTTCTTAAAGGACACTACTTACGCTGGCCACGACACAACTTCTGACGACGGATCTCCTGCACCTGCATTTACAGGAACAAAGTCTGGAGCTGAATTTAGTTACGCCAAACTCGAGCCAACATCTGCTTTAACAAGCACAGCCGCAGCGCTAGATATCGATCAAACTTGGAATGGCGGCAGTAATAACTTTAAGGCAATTGAAGTTGATATTACGGACACTGCTTCAGCCGCCGCCTCTAGCCTTCTAGATATTTCTGTTGGTAATGACCAAAAGTTATTACTTCGCAAAGATGGTGTTCTATCGTTAAATACTACTGATCAAACAGGCGTATTAACTTTAGTTCAAGATGCAGATACCCAATCAACAACCCTCAATTTGATTGACGGTACAGCAACTTGGAACGCTGCTGGATCTACTTTTGTTGGATTAGATCTAAGCTTTACTCAAACTGCGTACGCAGCAGGTTCTCAGCTTCTATCTATTTCTGCTAGCGCTAATAGAAACTTTATAATCGATGCCGAAGGCGAAATTGTTTCTAGATCTGAGTTTACTGGCGGTGGATTACAAACTGCGTTATTAGTTGATGTTACAGACACCTCTTCTGCTGCTAATTCGCTTCTCTTAGATCTCCAAGTCGGCGATTCTTCTAAGTTTAGCGTAGATAAAGATGGAGACGTAACTGCCCAAGGTGGCTTAACGATTGAGGGTGATTTTACTGCCAATGGCTCTGGTCGTTTTGATGACAGAGTTATTATTCAGTCTCAAATAAATAATAGCGGAGCCTATGCGGACTCTACCGAATTTAGATCTGACACTTCTACAATTAATGCCGGATCTAGCGTAGCTACAACATTTACTTCCTTTTTCAAAGCTAACTTCTCTACCGCTAAGCTTCTAGTTCAAGTTAAGCAAGGAACTAATGTTCATGCTACTGAGCTCCTACTTGTCCACGACGGCACTGACGTTTATATGACAGAGTACGGAACAGTTTACAACTCTGACATCCTTGTTACTTTTGACGCTGTTGTTAGTGGAAACGATATTGTAGTCCAAGCAACAAATACTTCTGCTTCAGTTACTGCAAACGCCCATACAACTATTAAGAGCCTAACAACTGGAATCAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
829cf24ba724472e3f81fd9ac68f72fbd2e1efbd617885fb4d7543ebf0d1b104
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank