Protein

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Genbank accession
XJW12925.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSSRGQFVGSGPDSGIYQPAPVPSTLEDLPPFLSDEFLKIAGLINGILEGGAFPPQSELPKRVFNGRMVYFTKAIAPDITNAGLWIYLDGWKLVVAL
Physico‐chemical
properties
protein length:97 AA
molecular weight: 10465,96140 Da
isoelectric point:4,81036
aromaticity:0,11340
hydropathy:0,16804

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Photobacterium phage PhCF1.2
[NCBI] 		3376961 Viruses >
Host Photobacterium ganghwense
[NCBI] 		320778 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJW12925.1 [NCBI]
Genbank nucleotide accession
PQ521129.1 [NCBI]
CDS location
range 34117 -> 34410
strand -
CDS
ATGAGTTCTCGTGGACAATTCGTAGGGTCTGGCCCAGATAGTGGTATCTATCAGCCAGCTCCAGTTCCTAGTACTTTAGAGGATTTGCCACCATTTCTGAGTGACGAGTTCCTAAAGATTGCAGGGCTTATCAATGGTATTCTTGAGGGTGGTGCATTTCCACCCCAATCTGAATTACCTAAACGTGTATTCAATGGTCGTATGGTCTACTTTACAAAGGCAATTGCCCCAGACATCACAAACGCAGGTCTTTGGATTTACCTTGATGGATGGAAATTGGTAGTTGCTTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc892850689a64ff0075a5bfd1f8000b6772be103c601e8b81bf09bfebb8319f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic insights into PhCF1.2: A novel lytic bacteriophage targetting Photobacterium ganghwense Keerthi Babu,R., Sobhana,K.S., Aleena,A., Neethu,K.P., Jayasree,V.S., Grinson,G. and Gopalakrishnan,A. 2020-12-31 — GenBank