Protein

View in Explore
Genbank accession
QXG07664.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAIDTFKYCIQVQSNGGSATEENSAREVSFGNGYVQVASAGFNVSRRSFNVVYAALDWAAMQSFCRSHVITPFIWTTPEGDVGLFRVKAGTIASKVVSRKVREINCVFVEQFTAMK
Physico‐chemical
properties
protein length:116 AA
molecular weight: 12785,42310 Da
isoelectric point:8,93005
aromaticity:0,12069
hydropathy:0,06552

Domains

Domains [InterPro]
IPR010265
RBD
4–112
IPR010265
QXG07664.1
1 116
Architecture
RBD
RBD 4-112 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Snitter
[NCBI] 		2851075 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXG07664.1 [NCBI]
Genbank nucleotide accession
MZ333132.1 [NCBI]
CDS location
range 26000 -> 26350
strand -
CDS
ATGGCGATTGACACGTTTAAATACTGCATCCAGGTGCAGTCTAACGGAGGCTCAGCTACGGAAGAAAACTCAGCCAGGGAGGTATCATTTGGGAATGGATATGTCCAAGTTGCCTCAGCTGGGTTTAACGTCAGTAGGCGCTCTTTTAACGTGGTGTATGCGGCTCTTGATTGGGCCGCTATGCAGTCCTTTTGCAGGTCACACGTTATCACCCCTTTCATCTGGACGACGCCAGAAGGTGACGTTGGTTTGTTCAGGGTTAAGGCTGGAACGATAGCGAGCAAGGTTGTCTCTCGCAAGGTGAGAGAGATTAATTGCGTTTTCGTTGAGCAGTTCACAGCAATGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
55c405a62ff41e901ccbba800abc80f86a47a95850c571be2d1dd191222efee6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Erwinia phages isolated from Organic waste Alanin,K.W.S., Djurhuus,A.M., Olsen,N.S., Carstens,A.B., Nielsen,T.K., Kot,W. and Hansen,L.H. 2023-01-20 — GenBank