Protein

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Genbank accession
XKC18924.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVNILDFGTTKAALLSAIASGAKSIYFPEGEYNYTGAAIYLDRPINLYGDGKGASIIKLTEGFRTNSGGLNVRDLEFVATTTSGSNIAFKTHYPDDKWALADMVGFTFDNVRFRGFFYSTYLAAANYGYASDPSFVPVGLVKNVKITNSDSYAPSTGNAGHFQHLRAYDVELIGNSTYGGAGATSYNFIGGNGYLRVLGNYDEKNSYGSCQIENQSGKSVVTGNTFGKKLWIDDSSNVAVTGNVIDGELHISIQNYDVKNVVATGNVVGRVIIGKFGDAQAQTNPLSMDAIIINDNVIGGTGNYGLFISDDNNRIWRIDVDHNTFVGEHTSGTIGVVRASNQYIRLTNNIMINNPLDFGKRTIITSGSGGYILNSGNV
Physico‐chemical
properties
protein length:378 AA
molecular weight: 40617,65750 Da
isoelectric point:5,68119
aromaticity:0,11111
hydropathy:-0,14577

Domains

Domains [InterPro]
IPR012334
STR
2–287
IPR012334
IPR012334
STR
2–300
IPR012334
IPR011050
STR
18–268
IPR011050
XKC18924.1
1 378
Architecture
STR
STR 2-300 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC18924.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7596
Central domain 11 367 358 0,9992
C-terminal 368 378 10 0,2214
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-367
C-terminal
368-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Arthrobacter phage Amavida
[NCBI] 		3367555 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC18924.1 [NCBI]
Genbank nucleotide accession
PQ244017 [NCBI]
CDS location
range 6783 -> 7919
strand +
CDS
TTGGTAAATATTCTCGATTTTGGCACTACAAAGGCTGCGCTTCTGTCCGCTATTGCGTCAGGCGCGAAGTCGATCTATTTCCCCGAGGGGGAGTACAACTACACCGGAGCGGCGATCTACCTTGACAGGCCGATCAACCTCTACGGTGACGGTAAGGGTGCTTCTATCATCAAACTGACTGAGGGTTTCCGGACCAACAGCGGCGGTCTGAACGTTAGGGATTTGGAGTTTGTAGCTACTACGACTTCCGGCTCCAACATAGCCTTCAAGACGCACTACCCAGATGATAAGTGGGCACTGGCAGATATGGTGGGCTTCACGTTTGACAACGTGCGATTCCGTGGATTCTTCTATTCCACCTATCTCGCTGCTGCAAATTATGGGTACGCTTCCGATCCGAGCTTTGTTCCGGTCGGCCTTGTAAAGAACGTGAAGATCACCAATAGTGACAGCTATGCTCCTTCCACTGGCAACGCAGGTCACTTCCAGCATCTTCGGGCGTATGACGTTGAACTGATCGGTAACTCCACTTATGGTGGTGCCGGTGCGACCTCATACAACTTCATTGGTGGTAACGGTTACTTGCGTGTGCTCGGTAACTACGACGAGAAGAACAGCTACGGCTCATGCCAGATTGAGAACCAGTCAGGCAAGTCAGTTGTCACAGGCAACACCTTTGGCAAAAAGCTGTGGATTGACGATAGCTCCAACGTAGCTGTTACAGGCAACGTTATTGATGGTGAGTTGCATATCAGCATTCAGAACTACGATGTGAAGAATGTTGTTGCTACAGGCAACGTTGTCGGTCGAGTGATTATCGGCAAGTTCGGTGATGCTCAGGCTCAGACCAACCCGCTGTCTATGGATGCGATCATCATCAACGACAACGTTATTGGTGGAACCGGCAACTACGGTCTGTTTATCTCCGATGACAACAACCGTATCTGGCGTATTGACGTAGACCACAACACGTTTGTTGGTGAGCATACTTCCGGAACCATCGGCGTTGTTCGGGCAAGCAATCAGTACATTCGCTTGACCAACAACATCATGATTAACAACCCTCTGGACTTTGGTAAGCGCACCATCATTACTTCCGGTAGTGGTGGCTACATTCTGAACTCCGGTAACGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6157027850d98c9d5c941a23ae5da09d16fbdfecdcfcad04b49102f3cb53f696
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8517
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50