Protein

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Genbank accession
URG13123.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLTKIKFAPGIDKQDTAVGAEGRWVDSDNVRFRYGLPEKVGGWQSLLTDTLVGVARKQHAFVDQDGNRYVAIGTDKFLIVYFEGQFFDVTPLATTISSATFTFNGSTTITITTSAAHNLEDGDIVLFDSVTLPGGTGLSASDFEDKLFQVVTTPTANTFTITFTSSGSAASGGSVDIKPYERVGPAAQTYGYGFGISQYGGTVQGAQTTALNGALLADTAGTGGAGTAVTVVSTTGFPTAGTIAIANELITYTSKSATQFLGITRGAKGTATTGTSNGQAHSTAATVTNATDFSGWGDAVDAATVTLEPGLWSLSNFGDVLVATIANGKTFTWDSSIAARLSTRASTTTSGFQTTNNPTATRTTLISPTTRHLIHFGTETTIGSPSTQDDMFIRFSEDENINGYTPEATNTAGTQRIQDGTKIVGALVAKENILVWTDNALYTMKFVGAPFTFGFEQVGTNCGLIGKNAAIEIDGVAYWMGNNGFFSFDGTVNTLPCSVEDYIYDDVDTTKGQQVCAGINNLFTEVTWWYPTAGSDFNNRYVVYNYGQNNAQLPMGNWYTGTNTNSIRTTWIDSLVYPKPYATAFNSSNTGTFPAIIGETGLGQSVLFEHESGTDQVNPDGSVTALTSFIQSFSFSLQPDQAEIFLAMRRFLPNFKVLTGNNQVTLSIKDFPAQDDAQTTLSPFTITSSTLKVDTRARGRYANIKIENTGVGESWRFGTFQVDIQPDGRRG
Physico‐chemical
properties
protein length:731 AA
molecular weight: 77998,31630 Da
isoelectric point:4,69663
aromaticity:0,10807
hydropathy:-0,14966

Domains

Domains [InterPro]
DC_0191
STR
1–731
DC_0191
IPR023366
STR
94–177
IPR023366
URG13123.1
1 731
Architecture
STR
STR 1-731
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13123.1
1 731
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9439
Central domain 93 291 200 0,3154
C-terminal 292 731 439 0,3641
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-291
C-terminal
292-731

Taxonomy

  Name Taxonomy ID Lineage
Phage phage 023Pt_psg01
[NCBI] 		2945965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13123.1 [NCBI]
Genbank nucleotide accession
MW574966 [NCBI]
CDS location
range 46385 -> 48580
strand +
CDS
ATGCTTACGAAGATTAAGTTTGCTCCCGGAATAGATAAACAAGACACTGCCGTTGGGGCAGAAGGTCGTTGGGTCGATTCAGATAATGTTAGATTTAGATATGGACTACCAGAAAAAGTTGGTGGTTGGCAATCATTACTTACAGATACTTTAGTAGGTGTAGCTAGAAAACAACACGCATTCGTTGACCAAGATGGTAATAGATACGTAGCCATTGGTACAGATAAATTTTTAATTGTATATTTTGAAGGTCAGTTTTTTGATGTAACTCCTTTAGCAACTACTATTTCATCAGCTACATTTACTTTTAATGGTTCTACAACCATTACAATTACAACATCAGCAGCACACAATTTAGAAGATGGTGACATTGTTTTATTTGACAGTGTAACTTTACCAGGCGGCACAGGATTAAGTGCATCTGACTTTGAAGATAAACTATTTCAAGTTGTAACAACTCCAACAGCAAACACTTTTACTATAACTTTTACAAGTTCTGGTTCTGCAGCTTCTGGTGGTAGTGTAGATATAAAACCTTATGAAAGAGTGGGTCCAGCTGCACAAACTTATGGTTATGGTTTTGGTATTAGTCAATATGGTGGTACAGTTCAAGGTGCACAAACTACAGCTTTGAATGGTGCACTTCTCGCGGATACTGCTGGTACAGGTGGAGCGGGGACCGCGGTTACAGTTGTTAGTACAACAGGATTTCCTACTGCAGGAACTATTGCAATAGCAAACGAATTAATTACATACACCTCAAAAAGTGCTACACAATTTTTAGGTATTACTAGAGGTGCTAAAGGTACAGCAACTACTGGTACATCAAATGGTCAAGCTCATTCAACAGCAGCAACGGTTACAAATGCTACAGACTTTTCAGGATGGGGAGATGCAGTGGATGCAGCTACGGTTACTCTTGAGCCAGGACTTTGGTCGTTAAGTAATTTTGGTGATGTATTAGTTGCAACAATTGCTAATGGTAAAACTTTTACTTGGGATTCTTCTATTGCAGCAAGATTATCTACACGTGCTTCTACAACTACATCAGGATTTCAAACTACAAACAATCCAACAGCTACAAGAACAACTTTAATTTCACCTACTACACGTCACTTAATTCATTTTGGAACTGAAACAACTATTGGATCACCTTCTACACAAGACGATATGTTTATAAGATTTTCTGAAGATGAAAATATAAATGGATATACACCAGAAGCAACTAATACAGCAGGTACACAAAGAATACAAGATGGTACAAAAATTGTAGGAGCTTTGGTTGCAAAAGAAAATATTCTCGTATGGACAGATAATGCATTGTACACAATGAAATTTGTTGGTGCTCCATTTACATTTGGTTTTGAACAGGTTGGTACAAACTGTGGACTGATTGGTAAGAATGCAGCTATTGAAATTGATGGTGTTGCATACTGGATGGGTAATAATGGTTTCTTCTCTTTTGATGGTACGGTTAACACACTGCCTTGTAGTGTTGAAGATTATATTTATGATGATGTTGATACAACAAAAGGCCAACAAGTTTGTGCCGGTATTAATAACCTATTTACAGAAGTAACTTGGTGGTATCCGACAGCTGGATCTGATTTTAATAATAGATATGTAGTTTACAACTACGGTCAAAACAATGCACAATTACCTATGGGTAATTGGTATACAGGAACCAACACTAATTCAATTAGAACAACTTGGATTGATTCATTAGTATATCCTAAACCATATGCTACGGCTTTTAATAGTTCTAACACAGGAACATTTCCTGCAATTATAGGTGAAACAGGTTTAGGTCAAAGTGTATTGTTCGAACACGAGTCGGGGACCGATCAAGTAAATCCAGATGGTAGTGTAACCGCATTAACATCTTTTATACAATCATTTAGTTTTTCTTTACAACCTGATCAAGCAGAAATATTTTTAGCTATGAGAAGATTTTTACCAAACTTTAAAGTGTTGACAGGTAACAACCAAGTCACACTATCTATAAAAGATTTTCCTGCACAAGATGATGCACAAACTACATTAAGTCCTTTTACAATTACTTCATCAACTTTAAAAGTTGACACAAGGGCCAGAGGTAGATATGCAAATATAAAAATAGAAAATACGGGTGTAGGTGAATCGTGGCGATTTGGTACATTCCAAGTTGATATACAACCAGATGGGAGAAGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0cd9897f67c452fec8689f78fe17f82a94e5b16bb17818a4f556c6aebafb4bfd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Global distribution of Type-VIII Secretion System operons transferred between Myo and Podoviruses of the dominant marine bacterium SAR11 Wittmers,F., Needham,D.M., Hehenberger,E., Giovannoni,S.J. and Worden,A.Z. 2011-12 — GenBank