Protein

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Genbank accession
UGO54086.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNVNKVVSEHDFSCSELSSYEYLQPYNRTKNMAITGIGAENTRTYPVENITALRAVVPQADGQLFEMVGAPIDNGTGRNQKGGVFRYYADLNIADYPDDGGYFIKPGAGTGVLIRQHEPNEFFVDWWITSPDTDFAFAMTRLQACLVKLNLDYPVLVRATGPTYKLASTLNIDGSYADYNFEDCKFIWTTNPAVAVQFSASKDVGPKRVIVSPRTYFRGGIFTGAGGVAKGTNVGFDCTFARGNIAGVNFENVTITGFDRTVSYGSNAYMYSWTGCRFGGGVAIHTKANASNFGENMNYHNCVFGDMYRFMDMDTGGGFYFHNCSFDYSGENDAAVPLFRVSGQINFNSCHFEWGNANRPNSGNSVFRLGGDSTYVVIRDGIILLNDNAATVHDYWFNFGSAGAAAAILDTYVYGARFSKAWGSRDFEMKIKTNGNGNTPNVPANITSKRTEASLLIDPTMNDVTLPDFWTVGEFDGTDATRTRLKSPSRQVVANGDGTVTFVTLAKSNEQPGMLFPVNDLEVPVINFDYKVKHTPANFNAFVTWFWTRVEGDTRGYRVVKRVQATMLGQQTLTQNPDFQSAVPTSAYTFRWPIKPRWATHMEFRINMSQFEAASDGTPNGVTIRNLYHNYFNSSM
Physico‐chemical
properties
protein length:636 AA
molecular weight: 70526,95200 Da
isoelectric point:5,97511
aromaticity:0,13522
hydropathy:-0,30220

Domains

Domains [InterPro]
IPR059934
RBD
47–116
IPR059934
DC_1407
STR
93–636
DC_1407
UGO54086.1
1 636
Architecture
RBD
STR
RBD 47-92 | STR 93-636
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGO54086.1
1 636
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,9887
Central domain 136 453 319 0,9817
C-terminal 454 636 182 0,9848
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-453
C-terminal
454-636

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_Haymo
[NCBI] 		2902685 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO54086.1 [NCBI]
Genbank nucleotide accession
OL539468 [NCBI]
CDS location
range 125652 -> 127562
strand +
CDS
TTGAACGTAAATAAGGTAGTCTCAGAGCACGATTTTTCGTGCTCTGAGCTATCTTCTTATGAATATCTACAGCCTTACAATAGGACTAAAAACATGGCAATCACTGGCATTGGGGCGGAGAACACCAGGACTTACCCTGTAGAGAATATCACAGCATTACGTGCAGTCGTACCTCAAGCAGATGGTCAGTTATTTGAAATGGTCGGAGCTCCGATCGATAACGGTACAGGACGTAACCAAAAAGGTGGCGTGTTCCGTTACTACGCAGATCTCAACATCGCTGATTATCCAGATGACGGCGGTTATTTTATTAAACCGGGAGCGGGCACTGGTGTTCTGATTCGTCAGCACGAACCTAACGAGTTCTTTGTTGATTGGTGGATCACTTCCCCAGATACTGACTTCGCGTTCGCTATGACCCGCCTACAGGCTTGCCTGGTTAAATTAAACTTGGACTACCCTGTATTGGTCAGAGCAACTGGCCCAACCTACAAGTTGGCTTCTACGTTGAACATCGACGGTAGTTACGCCGACTATAACTTCGAAGATTGTAAATTCATCTGGACAACTAACCCAGCAGTTGCAGTGCAGTTCTCAGCGTCTAAAGATGTTGGTCCTAAGCGCGTCATTGTTTCTCCACGTACCTATTTCCGAGGCGGTATCTTCACAGGGGCAGGCGGAGTAGCTAAGGGAACTAACGTAGGGTTCGATTGTACCTTTGCTCGCGGTAACATTGCAGGGGTAAACTTCGAGAACGTGACGATCACTGGATTTGACCGTACCGTTTCTTACGGTTCGAATGCGTACATGTATAGCTGGACTGGGTGTCGTTTCGGTGGTGGTGTTGCAATCCACACCAAAGCTAATGCCAGTAACTTCGGCGAAAACATGAACTACCATAACTGCGTATTCGGCGATATGTATCGGTTCATGGATATGGATACTGGCGGTGGTTTCTACTTCCACAACTGTAGTTTCGACTATAGTGGGGAGAATGACGCTGCAGTTCCATTGTTCAGGGTATCTGGCCAAATCAACTTCAATAGTTGTCACTTTGAATGGGGTAACGCCAACCGACCTAACTCCGGTAACTCGGTGTTCCGTTTAGGCGGTGATTCCACTTACGTAGTTATTCGCGACGGTATTATCTTACTTAACGATAATGCGGCTACGGTGCATGACTATTGGTTTAACTTCGGTAGCGCAGGAGCGGCAGCGGCGATCCTCGATACTTACGTTTACGGCGCACGGTTTAGTAAGGCATGGGGCTCTCGCGATTTCGAGATGAAGATCAAGACTAATGGTAATGGGAATACACCTAACGTACCTGCCAACATTACGTCTAAACGTACAGAAGCCTCATTGCTGATCGACCCAACTATGAATGACGTAACTTTACCTGATTTCTGGACAGTGGGCGAATTTGATGGAACTGATGCTACGCGTACTCGTTTGAAATCGCCTAGTCGTCAAGTTGTCGCTAACGGGGATGGTACTGTTACTTTCGTAACATTGGCTAAGTCGAACGAACAGCCAGGTATGCTCTTCCCAGTAAACGATTTAGAAGTACCGGTAATTAACTTCGATTATAAAGTGAAACATACCCCTGCCAACTTCAACGCATTCGTTACGTGGTTCTGGACTCGAGTGGAAGGTGACACCCGTGGCTACCGGGTAGTGAAGCGTGTTCAGGCGACAATGCTTGGTCAGCAAACTCTGACGCAGAACCCAGACTTCCAGTCGGCAGTTCCTACTTCGGCCTATACTTTCCGTTGGCCGATTAAACCACGTTGGGCTACTCACATGGAGTTCAGGATTAACATGTCTCAGTTTGAAGCAGCTTCCGATGGAACACCTAACGGGGTAACTATCCGGAACCTTTACCACAACTACTTTAACAGCTCAATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
98aac3e5d36e6e0b1977284b19195a6717431f21b12ffe4727f2d870d9c9432a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6646
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50