Protein

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Genbank accession
XEN39259.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MAVPDPQLRYATDVFDADGVTTDWQISFTGGYINPSHVYAMSGLLDEETQLLTDRTPHTVEVLSEDDDASTVRVSPAVAAGRKLYIYRSTPVQQMLVDYVNGSIISKTNLNLSNDQLLKIIQEMFDSLNIATLSIDQQVGVIVDLNEIIQNIYKQVTELLAAGGIVSVAPRVWSGAWTGDQVDDTDFDIVGADVSGAGFYDVYVNGIGMQPDVDYQVTLADDTDPSSIRFATVPAEGSIWFAVLRGYAKPYTGPAPLTAGSLRVPITQAEGPTFYADKVVEYGLVRCTYSTGCVVTINAIPAVGDSETKLGAGSYFSFQQKAGPVSITADSGVTLEVPAGCIAATRAANSVVTATCVSGDTNTWLLSGDLAKE
Physico‐chemical
properties
protein length:373 AA
molecular weight: 39727,01640 Da
isoelectric point:4,17354
aromaticity:0,08311
hydropathy:0,07668

Domains

Domains [InterPro]
DC_0914
STR
2–373
DC_0914
IPR005604
ATT
15–133
IPR005604
XEN39259.1
1 373
Architecture
STR
ATT
STR
STR 2-14 | ATT 15-133 | STR 134-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN39259.1
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 261 261 0,9973
Central domain 262 362 102 0,0255
C-terminal 363 373 10 0,9942
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-261
Central
262-362
C-terminal
363-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage L13.2
[NCBI] 		3239040 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39259.1 [NCBI]
Genbank nucleotide accession
PQ093899.1 [NCBI]
CDS location
range 30566 -> 31687
strand +
CDS
ATGGCAGTTCCAGACCCGCAGCTGCGCTACGCGACAGACGTGTTCGACGCCGATGGCGTGACCACTGACTGGCAGATCAGCTTTACCGGTGGCTACATCAACCCGTCCCACGTGTACGCGATGAGCGGACTGCTGGACGAGGAAACGCAGCTGCTGACCGACCGGACTCCGCACACCGTGGAAGTCCTGAGCGAAGACGACGACGCTAGCACCGTCCGTGTCTCGCCTGCCGTCGCCGCTGGGCGCAAGCTCTACATATACCGTAGCACTCCGGTGCAGCAGATGCTCGTTGACTACGTTAACGGTAGCATCATAAGCAAGACCAACCTTAACCTCAGCAACGACCAACTCCTGAAGATCATCCAGGAAATGTTCGACTCGCTCAACATCGCCACCCTTAGCATCGACCAGCAGGTCGGTGTGATCGTGGACCTGAACGAAATTATCCAGAACATCTACAAGCAGGTCACTGAGTTGCTGGCCGCAGGTGGTATCGTATCCGTCGCTCCGCGCGTCTGGTCCGGTGCATGGACCGGCGATCAAGTAGACGACACCGACTTCGACATTGTGGGCGCGGACGTGTCCGGCGCTGGCTTCTACGACGTGTACGTCAACGGCATTGGCATGCAGCCGGACGTTGACTATCAGGTCACTTTGGCCGACGACACCGACCCTAGCTCCATCCGCTTCGCCACGGTCCCCGCCGAAGGCAGCATCTGGTTCGCCGTGCTGCGTGGTTACGCCAAGCCCTACACCGGGCCGGCTCCGCTCACTGCCGGAAGTCTACGGGTCCCCATTACCCAGGCAGAAGGCCCGACCTTCTACGCCGACAAGGTAGTGGAGTACGGGCTGGTGCGCTGCACCTACAGCACCGGGTGCGTGGTAACCATCAACGCAATCCCGGCTGTGGGTGACAGCGAGACTAAGCTGGGCGCGGGCAGCTACTTCAGCTTCCAGCAGAAAGCAGGTCCGGTCAGTATTACCGCTGACTCCGGGGTTACCCTCGAAGTACCAGCTGGTTGTATCGCGGCCACTCGCGCGGCCAATTCCGTAGTCACCGCTACCTGCGTTAGCGGTGACACCAACACGTGGTTGCTATCGGGCGACCTTGCCAAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
775ae83a834098297229c345285e98d0576682b4c0539d7213cc6208f24a727f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7780
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50