Protein

View in Explore
Genbank accession
XNS38658.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATEKVLKGRKGGSSSSRTPTEQPDDLQSVAKAKILVALGEGEFAGQLTGKDIYLDGTALENADGSQNFSGVTWEFRAGTQAQKYIQGIPGTENEISVGTEVSSATAWTRTFTNTQLSAVRLRLKWPSLFKQENDGDLVGYSVNYAIDLQTDGGTWQTVLNTSVTGKTTSGYERSHRIDLPQAGSTWTIRLRKITSDANSAKIGDTMTLQSFTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQISCEPRGRVIRVPDTYDPETRSYSGTWTGAFKWAWTDNPAWIFYDLVVSDRFGLGHRLTTANIDKWTLYQVAQYCDQMVPDGKGGNGTEPRYTCNVYIQDRNDAYTVLRDFAAIFRGMTYWGGDQIVALADMPRDVDYSYTRANVVGGRFTYSSSTTKGRYTTALVSWSDPGNAYADAMEPVFEQALVARYGFNQLEMTAIGCTRQSEANRKGRWGILTNNKDRVVSFDVGLDGNIPQPGYIIAVADELLSGKVMGGRISAVNGRVIKLDRVADAAAGDRLILNLPSGASQSRTIQAVNGESVTVTTAYSETPQAEAVWVVESDELYAQQYRVVSVSDNDDGTFSITGAWHDPDKYARIDTGAIIDQRPVSVIPPGNQSPPANIVISSFSVVQQNISVETMRVSWDQAQNAIAYEAQWRRNDGNWVNVPRSSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFIASENVVFGIELNWGFPANTDDTLKTEIQYSLTGTEDDAMLLADVPYPQRKYQQMGLKAGQIFWYRAQLVDRSGNESGYTEWVRGQASIDVSDITDAILEDMKGSETFKDLIENAVDSNEKIAGMANDIKQANDELEQQAKDIAKNAQDVGKVQTSVSELSSTVGNVSSSLSQLEQTVATTDTALGQRIDSISVSMDGMTGGVKNSAIAIIQNGLAQVATRKRLSATVAGNSAQLDRIDEVIVNEKEATARSLLSLQTDVNGNKASINSLNQTFSDYQQATATQINGITATVNGHTSAITTNAQAIANVNGDLSAMYNIKVGVSSNGQYYAAGMGIGVENTPSGMQSQVIFLADRFAVTSQAGSTVSLPFVIQNGQTFIRDTFIQDGTISNAKIGNYIQSNNYVAGSVGWKLDKSGTFENYGSTAGEGAMKQTNQTISVKDGNNVLRVQVGRLTGAF
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 128328,91150 Da
isoelectric point:4,91739
aromaticity:0,08369
hydropathy:-0,34861

Domains

Domains [InterPro]
DC_0023
STR
1–1182
DC_0023
IPR053171
Unmapped
4–880
IPR053171 IPR015406
IPR055385
ATT
92–218
IPR055385 IPR032876 IPR003961 IPR003961 G3DSA:1.20.1480.30
IPR013783
STR
622–714
IPR013783 Coil
IPR003961
STR
623–717
IPR003961
IPR003961
STR
628–702
IPR003961
IPR036116
STR
637–702
IPR036116
XNS38658.1
1 1183
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-218 | STR 219-342 | ATT 343-505 | STR 506-1182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS38658.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,8038
Central domain 540 1122 584 0,0315
C-terminal 1123 1183 60 0,9122
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-1122
C-terminal
1123-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Fostie
[NCBI] 		3233696 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS38658.1 [NCBI]
Genbank nucleotide accession
PP925832.1 [NCBI]
CDS location
range 2 -> 3553
strand -
CDS
ATGGCTACAGAAAAAGTGTTAAAGGGCCGCAAGGGCGGCAGCTCAAGTTCCCGAACCCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGGGAAGGGGAGTTTGCAGGGCAGCTAACCGGAAAAGATATCTATCTGGACGGAACGGCCCTGGAGAATGCTGACGGCTCCCAAAACTTCAGCGGAGTAACGTGGGAATTTCGCGCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAAATCAGCGTAGGAACTGAAGTATCAAGCGCTACAGCATGGACGCGCACCTTTACTAACACGCAGCTTTCAGCAGTTCGCCTGCGTCTGAAATGGCCCTCGCTTTTCAAACAGGAGAACGACGGCGATCTGGTGGGTTACTCGGTCAATTATGCGATTGACCTGCAGACGGACGGCGGCACATGGCAAACGGTACTCAATACCAGCGTGACCGGCAAAACAACGTCTGGTTATGAGCGCAGCCACCGTATTGATTTACCGCAGGCTGGAAGCACCTGGACAATACGCCTGCGTAAGATTACCTCTGATGCCAACAGCGCGAAGATCGGCGACACGATGACGCTTCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCCAACACCGCACTGCTCTACATCGAATTCGACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGTGTTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCTCTTATAGCGGTACATGGACCGGTGCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGATCTTGTCGTTTCTGACCGCTTTGGCCTCGGGCACCGTTTGACCACTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCCCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTATACAGTCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTAGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTGTTGGCGGTCGATTCACCTATTCGAGCAGCACCACGAAAGGCCGCTACACCACAGCGCTGGTTTCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTATTTGAGCAGGCGCTGGTGGCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAAGCGAACCGAAAGGGGCGCTGGGGCATTCTTACCAACAACAAGGATCGCGTTGTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGGTACATCATCGCCGTGGCAGACGAGCTGCTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCTGTTAACGGTCGCGTTATCAAACTTGACCGCGTGGCAGATGCAGCAGCAGGTGATCGCCTTATTCTCAACCTGCCTTCCGGAGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAATCAGTCACAGTCACCACTGCATACAGTGAAACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCTGACGAGCTCTACGCGCAGCAGTATCGAGTTGTCAGCGTTTCCGATAACGATGATGGCACTTTCTCGATTACCGGCGCATGGCACGACCCGGATAAATATGCCCGTATCGATACCGGAGCCATCATTGACCAGCGGCCGGTGAGCGTGATCCCGCCGGGCAACCAGTCTCCGCCTGCAAACATCGTGATCAGCTCGTTTTCTGTGGTGCAGCAAAATATCAGCGTCGAAACGATGCGCGTGAGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAATGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCAGCTCCACAACGTCATTCGACGTCCCCGGAATTTATGCCGGGCGCTACCTGGTGCGCGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGATGGGGCTATTCAGAAGAGAAAACGCTGACGGGCAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTCATCGCTTCTGAAAATGTGGTGTTCGGTATCGAGCTGAATTGGGGATTCCCGGCGAATACCGACGACACGCTGAAGACGGAAATTCAATATAGTCTGACCGGTACCGAGGACGATGCAATGCTGCTGGCCGATGTGCCTTACCCGCAGCGCAAATATCAGCAGATGGGCCTTAAGGCTGGGCAGATTTTCTGGTACCGCGCTCAGCTGGTGGACCGCAGCGGCAACGAATCAGGGTATACAGAATGGGTGCGAGGACAGGCCAGCATCGATGTTTCCGACATCACAGATGCCATTCTGGAGGATATGAAAGGGTCTGAAACATTCAAGGACCTGATCGAGAACGCGGTAGACAGCAACGAAAAAATTGCTGGCATGGCTAACGATATCAAACAGGCCAACGACGAACTGGAGCAGCAGGCGAAGGATATCGCCAAAAATGCCCAGGACGTCGGGAAGGTTCAGACCAGCGTTAGTGAGCTTTCGAGCACGGTCGGGAATGTTTCGTCTTCACTCAGTCAGCTTGAGCAGACCGTTGCGACGACGGATACCGCCCTAGGCCAGCGAATCGACAGCATCAGCGTTTCTATGGACGGCATGACGGGTGGGGTGAAGAACTCAGCCATTGCCATTATCCAGAACGGGCTGGCGCAGGTGGCCACACGAAAAAGGCTTTCCGCGACAGTCGCCGGTAACAGTGCGCAACTGGATCGTATTGATGAGGTAATCGTTAACGAGAAGGAGGCAACGGCGCGTTCGCTGCTGAGTTTGCAGACGGACGTCAACGGCAACAAGGCATCCATCAACAGCCTGAATCAGACGTTCTCCGACTATCAGCAGGCTACGGCTACGCAGATAAACGGCATTACGGCGACCGTGAACGGGCATACCTCCGCCATCACCACTAACGCCCAGGCGATAGCCAACGTTAATGGCGACCTCAGCGCGATGTACAACATCAAGGTTGGTGTCTCCAGTAACGGGCAGTATTACGCCGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCTCAGGTCATCTTCCTGGCTGACCGTTTCGCCGTTACTTCTCAGGCTGGCAGTACTGTGTCCCTGCCGTTCGTTATTCAAAACGGACAGACGTTCATCCGCGACACTTTCATTCAGGACGGCACAATCAGCAACGCCAAAATTGGCAATTACATCCAGTCGAACAATTATGTTGCTGGCTCTGTAGGGTGGAAGCTCGATAAGTCCGGGACGTTTGAGAACTACGGTTCGACAGCTGGGGAGGGAGCCATGAAGCAGACCAACCAGACAATCAGTGTCAAGGACGGCAATAACGTTCTTAGAGTGCAGGTTGGCCGGTTAACGGGGGCGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3685d565488940669330d437687b44e51cf409f4cdc3479e4f6b7aec7905021e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50