Protein

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Genbank accession
ABV74332.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKVIDTEIYNNNQLGGTNRAGIQLQAGAEATEIDGCKIYDNQGTPTQSYGVQALGGDHSFTNGQIKNNAVDDINLSGGGTVETSQLKIGDDPLSGQITLSAGTSTVITNDNARSPSQLILLAANSQARGFQLPSAQSVVKGVSFTINHNTAAGDEIYNYKIY
Physico‐chemical
properties
protein length:162 AA
molecular weight: 16995,42050 Da
isoelectric point:4,63854
aromaticity:0,05556
hydropathy:-0,36667

Domains

Domains [InterPro]
IPR012334
STR
2–162
IPR012334
ABV74332.1
1 162
Architecture
STR
STR 2-162
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABV74332.1
1 162
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0033
Central domain 11 151 142 0,4877
C-terminal 152 162 10 0,9945
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-151
C-terminal
152-162

Taxonomy

  Name Taxonomy ID Lineage
Phage Thalassomonas phage BA3
[NCBI] 		469660 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Thalassomonas loyana
[NCBI] 		280483 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABV74332.1 [NCBI]
Genbank nucleotide accession
EU124666.1 [NCBI]
CDS location
range 36823 -> 37311
strand -
CDS
GTAAAAGTTATTGATACTGAAATATATAACAATAATCAATTGGGTGGCACCAACCGCGCTGGTATTCAGTTACAAGCAGGTGCCGAAGCTACTGAAATTGATGGTTGTAAAATATACGACAACCAAGGAACGCCAACACAATCTTATGGCGTACAAGCTCTTGGTGGCGATCACTCTTTTACAAACGGTCAGATCAAAAACAATGCCGTGGACGATATTAACCTTTCAGGTGGTGGAACAGTTGAAACTAGCCAGTTAAAAATAGGCGACGATCCCCTATCTGGTCAAATTACTCTAAGTGCTGGAACTTCAACAGTTATTACAAATGATAACGCAAGAAGCCCAAGCCAGTTGATTCTTTTGGCGGCAAATTCGCAAGCTAGAGGTTTTCAGTTGCCTAGTGCTCAATCAGTAGTTAAAGGGGTTAGTTTTACAATTAACCACAACACTGCTGCTGGTGACGAGATATACAACTACAAAATATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a154c69e89f3d32afd3e52c026df17cfffb6d47cfc5c2831e0c3565b1093e606
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7898
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy of coral disease Efrony,R., Loya,Y., Bacharach,E. and Rosenberg,E. 2007 — GenBank
Parameters affecting phage therapy of coral disease Efrony,R. and Rosenberg,E. 2006-11-24 — GenBank