Protein

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Genbank accession
AEB71666.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNPTYLKQIMQLAWQFFKQTGLKFSECLKKAWANYKLKKRMQQGIVRFYFQKVDGSIREAWGTLKADLLPETKGSERKENPTTQVYFDTEVNEFRCFKKFNLMY
Physico‐chemical
properties
protein length:104 AA
molecular weight: 12523,45850 Da
isoelectric point:9,69677
aromaticity:0,16346
hydropathy:-0,66923

Domains

Domains [InterPro]
IPR024401
STR
35–103
IPR024401
AEB71666.1
1 104
Architecture
STR
STR 35-103 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Riemerella phage RAP44
[NCBI] 		936152 No lineage information
Host Riemerella anatipestifer
[NCBI] 		34085 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEB71666.1 [NCBI]
Genbank nucleotide accession
HQ396194.1 [NCBI]
CDS location
range 28958 -> 29272
strand -
CDS
ATGAACCCAACATATTTAAAACAAATAATGCAATTAGCGTGGCAGTTTTTCAAACAAACAGGTTTAAAATTTAGCGAATGCCTAAAAAAAGCGTGGGCAAATTACAAACTAAAAAAGAGAATGCAACAGGGTATTGTTCGTTTCTACTTTCAAAAGGTAGACGGTAGCATTAGAGAAGCGTGGGGTACTTTGAAAGCCGATTTACTACCTGAAACCAAAGGTTCAGAACGAAAAGAAAACCCAACCACACAAGTCTATTTTGATACAGAGGTCAATGAGTTTAGGTGTTTTAAAAAGTTTAATTTAATGTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0200f41f8126e7b5d04790643447d723f7b05a1e485ab969d00111822a0237a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8726
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of the virulent bacteriophage RAP44 of Riemerella anatipestifer Cheng,L.F., Chen,H.M., Zheng,T., Fu,G.H., Shi,S.H., Wan,C.H. and Huang,Y. 2012 22856189 GenBank