Protein

View in Explore
Genbank accession
QQM15914.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MTIDLRAIRVGIEVSGRMHYYSATDGMRIKASGTKFANATQNECTVTISNLKRETRDFLLTETSPYNKNRKPKRLVVEVGRVSTGLFRIYVGDITSAEPSSPPDVDIVLKSKTGNASSGDVVSKSAQALSKLSQIAAGIASDVGATLDFQALDKLIANYTYTGGALGQINRLAEAGGVRAFLDDDRLIVQDFGKATAGRVKVLNLNSGLVGIPKANDKGVDVTYLIDGESVLGGKLILESKFNRALNGSYKVDQLKFDVASHEDPFFYTALCSRL
Physico‐chemical
properties
protein length:275 AA
molecular weight: 29591,30990 Da
isoelectric point:9,06550
aromaticity:0,06909
hydropathy:-0,13273

Domains

Domains [InterPro]
IPR054496
ATT
8–272
IPR054496
QQM15914.1
1 275
Architecture
ATT
ATT 8-272 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BAPh-2
[NCBI] 		2801361 Viruses > unclassified bacterial viruses >
Host Bordetella avium
[NCBI] 		521 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM15914.1 [NCBI]
Genbank nucleotide accession
MW168445 [NCBI]
CDS location
range 14320 -> 15147
strand +
CDS
ATGACGATTGATCTCCGGGCAATCCGTGTCGGGATCGAGGTTTCCGGCCGGATGCACTATTACAGCGCCACCGATGGGATGCGGATTAAGGCGAGCGGCACCAAGTTCGCCAACGCCACCCAAAACGAATGCACGGTCACGATCTCCAATCTCAAGCGGGAGACGCGGGACTTTCTGCTGACAGAAACGAGCCCGTACAACAAAAACCGCAAGCCCAAGCGGCTTGTGGTGGAGGTGGGCCGGGTATCGACCGGATTGTTTAGGATCTACGTCGGTGACATTACCAGCGCGGAGCCGAGCAGCCCGCCAGACGTGGACATTGTCCTCAAGTCAAAGACGGGCAATGCGTCAAGTGGCGATGTGGTTTCAAAGAGCGCTCAGGCGCTTTCTAAGTTGTCACAGATCGCGGCGGGCATCGCCTCGGATGTAGGTGCAACGTTGGACTTCCAGGCTCTAGACAAACTCATCGCGAACTACACCTATACAGGCGGGGCTCTTGGGCAGATCAACAGGCTGGCTGAAGCCGGTGGCGTTCGGGCGTTTCTGGATGACGACCGTCTGATCGTGCAGGATTTCGGCAAAGCGACGGCGGGCCGCGTCAAGGTGCTCAACCTGAATAGTGGCCTAGTCGGGATACCGAAGGCCAACGACAAGGGGGTCGATGTGACATACCTGATCGATGGCGAATCGGTGCTTGGCGGCAAGCTGATCCTAGAGAGCAAGTTCAACCGGGCGCTTAACGGCAGCTACAAGGTTGACCAACTCAAATTCGACGTGGCAAGCCACGAAGATCCATTTTTCTACACCGCGCTATGCAGCAGACTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
faa6ef5f48b2bd35bf6fcc2875ec4b67872bb6df778bbf2dd2c5507d28c25f15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Bordetella phages Churin,Y., Serian,D., Guetgemann,F., Mueller,A., Hammerl,J.A. and Kehrenberg,C. 2023-06-15 — GenBank