Protein

View in Explore
Genbank accession
QYW06483.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MGWITRGIVNVLNGSSNIAGGSTKFLTDGRIGDGFRGPDGRLYEVTNIATDFSLTINPPYEGPTLNSAPYYLVPIEGYVKDSADQLRAATQQIVAIPNTKQDKSANLTALSALAGQADRLIYFPAADTLAMAPFTAKARALMAASTNIAWQVEMGISVATATDPTPGKFLNVGYMGLGSKNNAPWQGTSLNPDDYLTGGCLIGQFLILGEALTGFLVTLPGSNASVCGQQFTDLSNSSYLTRVMNGSAWGTWVRHTGTHSVTTFNIDAAASFIGSTDRFFSTPETTGSIPFQYGFVRFMAMANNNFKQVAYEGVNTTATGSHIASRTYFGGVWSPWIKALNTGDHGVGGNNLYAGNVDQIVAAAPLGTSFWKLTSAATGPLPPASTTHEGNTLQVDKWDGNNATIIYRSRGAQFIRGVLDGAWTTAVWNLMYNAGNLTNPVDAARYGIMDSQTISGWRVVRWYNGFMVASMGGPALSFAANESKPLSYGLPVSFPDYGKCSVTAQLVAAASWDHYGAIQAFMGNPTAANLVVRNGAGGQTITLQNLTVSGYWK
Physico‐chemical
properties
protein length:553 AA
molecular weight: 58706,27380 Da
isoelectric point:7,00554
aromaticity:0,10850
hydropathy:-0,03671

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW06483.1
1 553
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,6021
Central domain 310 508 200 0,0028
C-terminal 509 553 44 0,9994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-508
C-terminal
509-553

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UAntarctica
[NCBI] 		2856996 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW06483.1 [NCBI]
Genbank nucleotide accession
MZ605292.1 [NCBI]
CDS location
range 44447 -> 46108
strand +
CDS
ATGGGATGGATCACCAGAGGCATCGTCAACGTCCTCAACGGCAGCAGCAACATCGCCGGCGGCAGCACCAAGTTCCTGACCGATGGGCGTATTGGCGACGGCTTCCGTGGGCCCGATGGCCGGCTATATGAAGTTACGAACATCGCTACAGACTTCAGCCTGACTATCAACCCACCCTACGAGGGCCCGACCCTTAACTCAGCCCCCTACTACCTGGTGCCGATCGAGGGCTACGTCAAAGACTCGGCGGACCAGCTGCGCGCAGCGACCCAGCAGATCGTCGCAATCCCGAACACTAAGCAGGACAAGTCGGCGAACCTTACCGCGCTCTCTGCTCTGGCAGGCCAGGCAGACAGGCTGATTTACTTCCCGGCGGCTGATACCCTGGCCATGGCACCCTTTACGGCTAAGGCTCGCGCTCTGATGGCCGCCAGCACCAACATAGCTTGGCAGGTGGAGATGGGGATCAGCGTGGCTACGGCTACAGACCCTACACCAGGCAAGTTTTTGAACGTCGGGTACATGGGCCTCGGCTCAAAGAACAACGCCCCGTGGCAGGGCACCTCGCTGAACCCGGATGACTACCTCACAGGCGGCTGCCTGATAGGCCAGTTCCTAATCCTCGGCGAAGCTCTAACAGGGTTCTTGGTCACGCTGCCAGGCAGCAACGCCTCTGTGTGTGGTCAGCAGTTCACGGACCTGTCCAACAGCTCGTACCTGACCAGGGTGATGAACGGAAGTGCCTGGGGTACTTGGGTTCGCCACACGGGCACTCACAGCGTAACTACCTTCAACATTGATGCCGCAGCCTCTTTTATTGGGAGCACTGATCGGTTTTTCTCTACGCCAGAAACCACTGGTAGCATTCCGTTTCAGTACGGGTTTGTGCGGTTTATGGCCATGGCTAACAACAACTTCAAGCAAGTGGCCTATGAAGGGGTAAACACCACTGCTACCGGGTCTCATATAGCCTCCAGGACGTACTTCGGGGGAGTATGGAGTCCGTGGATCAAGGCGCTTAATACGGGTGACCACGGCGTAGGCGGGAACAACCTGTACGCTGGAAACGTCGATCAGATCGTGGCTGCAGCTCCCCTTGGCACTAGTTTTTGGAAGCTGACCTCGGCGGCTACCGGCCCCCTACCTCCTGCATCCACGACCCATGAGGGTAATACGTTGCAGGTGGATAAGTGGGACGGTAACAACGCTACCATCATTTACCGGTCTCGCGGCGCTCAGTTCATACGAGGTGTACTTGACGGCGCCTGGACAACCGCCGTGTGGAACCTCATGTATAACGCAGGCAACTTGACTAATCCTGTCGACGCAGCTCGGTACGGGATCATGGACTCCCAAACTATCAGCGGATGGAGAGTGGTCAGGTGGTACAACGGATTTATGGTAGCGTCGATGGGGGGCCCTGCCCTCTCATTTGCGGCTAATGAGTCTAAGCCTCTTTCCTATGGGTTACCTGTCAGCTTCCCTGACTACGGTAAGTGCAGCGTTACAGCCCAGTTGGTGGCAGCGGCTAGTTGGGATCATTACGGGGCCATTCAAGCGTTCATGGGTAACCCGACAGCTGCCAATCTTGTAGTTCGCAACGGAGCTGGTGGGCAAACTATTACTCTGCAGAATTTAACTGTCTCGGGATATTGGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
55195133b7e3272d45f15a2b89eb7cd5cd00c90e9774951260d27ecb10d29bfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8269
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence and phylogenomic analysis of the two lytic bacteriophage isolated from terrestrial biotopes of Antarctica Holovan,V., Rabalski,L., Zlatohurska,M., Andriichuk,O., Budzanivska,I., Shevchenko,O. and Gupalo,A. 2021-12-16 — GenBank