Protein

View in Explore
Genbank accession
XCO37703.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MALYRQGKAAMDANGVITGTGTKWQSALSLIRPGSTIMFLSSPIQMAVINKVVSDTQINAITTNGAVVPSSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKNFDFDSLQDLANQVKQDSESAGASATAAAASESNAKTSETNAKASENAAKTSEVAAETARDQVQQIINDAGEQSTLVVLAQDDGSKHVSTLGNQPLAAVSHFKNKGMTDQDAVQSAFNSSNNVFIDTDITLTDYITFDRSKECYVYRKPGVVVTGHGYLPKLRTNPAHVVETAIRHNKTSDPNALSYDRVYSHQAFAAEMSVNDVASTASASENFVALYSGIETFNCGKQRIWAFNSVTNAHNLLTGDEVFGYELDMNVDGTLDGGGQYVGLYIAGIGDLSACANADGIRVQRLRDGVYKWQYGLRIFDSVTGINITDASTYSIFASGSAPIVRRKTTQNGGWAYTHSLSASSIKWGVDDYGDTYSRRLYLGAGDGKSKNRVNLDRGVSYYTTNAAVAWGSIAANAYVDKDLTTLVGVSIADWTNYTIDVTPIGYAGVMPVVAVQAYINSTKTQAYVRVINISGAALSSCNVGLNIKINGHSATN
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63852,06540 Da
isoelectric point:5,13406
aromaticity:0,08543
hydropathy:-0,16466

Domains

Domains [InterPro]
DC_0313
STR
1–594
DC_0313
XCO37703.1
1 597
Architecture
STR
STR 1-594 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37703.1
1 597
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,9889
Central domain 220 439 221 0,9428
C-terminal 440 597 157 0,9295
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-439
C-terminal
440-597

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146008
[NCBI] 		3232193 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37703.1 [NCBI]
Genbank nucleotide accession
PP889463 [NCBI]
CDS location
range 19947 -> 21740
strand -
CDS
ATGGCACTATACAGACAAGGCAAAGCCGCGATGGACGCAAACGGCGTTATCACCGGGACTGGCACGAAGTGGCAATCAGCCTTATCGCTCATTCGCCCAGGCTCAACAATCATGTTTTTATCGTCGCCGATTCAGATGGCGGTGATTAACAAGGTTGTCAGTGATACGCAAATTAACGCCATCACCACAAACGGCGCGGTTGTCCCGTCCAGCGATTACGCGATCCTTTTAAGCGACTCGCTGACCGTTGACGGCCTGGCGCAAGATGTTGCTGAAACTCTGCGCTACTATCAGTCACAGGAAACCGTGATCGCTGATGCAGTCGAGTTCTTCAAGAACTTTGATTTCGACTCCCTGCAAGATCTTGCCAACCAGGTTAAGCAGGATTCTGAATCTGCGGGCGCAAGCGCTACGGCTGCGGCGGCGTCTGAAAGCAATGCGAAAACTTCGGAGACGAACGCCAAAGCGTCTGAAAACGCGGCAAAAACTTCAGAGGTCGCAGCGGAGACTGCAAGAGACCAAGTTCAGCAGATCATCAATGATGCTGGCGAACAGTCAACGCTTGTTGTTCTGGCGCAGGATGATGGGTCAAAACATGTTTCAACGTTGGGAAATCAGCCGCTGGCCGCCGTAAGTCATTTCAAAAATAAAGGTATGACTGATCAGGATGCGGTTCAATCCGCTTTTAATTCATCAAATAATGTTTTTATTGATACAGATATCACTCTAACTGATTACATAACTTTTGACCGATCGAAAGAGTGCTATGTTTATCGCAAGCCGGGAGTTGTAGTTACAGGTCACGGGTACTTGCCAAAACTTAGAACCAACCCAGCCCATGTCGTTGAGACTGCAATAAGACATAACAAGACATCAGACCCTAACGCTTTATCTTATGACCGCGTTTATTCGCATCAAGCGTTTGCCGCTGAAATGTCAGTTAACGACGTTGCCTCTACGGCATCTGCATCAGAAAACTTTGTCGCATTGTACTCCGGTATTGAAACCTTCAATTGTGGAAAACAGAGAATATGGGCTTTTAACTCAGTAACTAACGCTCACAATCTACTCACTGGTGATGAAGTTTTTGGCTATGAACTTGACATGAACGTAGACGGAACCCTTGATGGAGGCGGCCAATATGTAGGATTGTACATCGCTGGCATTGGCGATCTTAGCGCCTGCGCTAATGCCGATGGTATTCGCGTGCAGCGGTTAAGAGATGGCGTCTACAAATGGCAATATGGATTGAGAATTTTTGATTCTGTGACTGGCATCAACATCACAGACGCATCAACATACTCCATTTTTGCAAGCGGTTCAGCTCCCATTGTCAGGCGTAAGACAACGCAAAACGGTGGTTGGGCATACACTCATTCCTTATCAGCCTCATCGATAAAATGGGGGGTTGATGATTATGGTGACACATATTCAAGGCGGCTGTACTTAGGCGCTGGAGATGGTAAGTCTAAAAACAGGGTGAATCTGGACAGAGGGGTCAGTTATTACACAACAAACGCCGCGGTCGCATGGGGATCTATCGCTGCGAATGCTTACGTAGATAAAGACCTCACTACTCTCGTTGGCGTTTCCATAGCGGATTGGACAAATTATACCATAGATGTGACGCCTATCGGTTATGCGGGGGTCATGCCAGTTGTAGCGGTTCAGGCTTATATCAACAGTACTAAAACCCAAGCATACGTGAGGGTTATTAATATCAGTGGTGCTGCATTATCTTCATGCAATGTTGGTTTAAACATTAAAATTAATGGCCATTCTGCTACAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46d3acbd51024290b16fbea1bb81f102170fb50bb6c0004e72d09072a2bea18c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank