Protein

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Genbank accession
AAR17458.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKIWEPSGGVDDKVLFGMYPEDLDAQDRQELYAEAFEDIVKSYSTMATACRYQAIIDEMIDDETRAQLIADTQAAMEAVSIARTAMDSISESSTAMDPISESIVAMEAVIDSDDIALPAVVESQIAMDAVSTSQTAMDAVSDSQTAMDAVSDSQTAMDAVSVSQTAMDAVSDSQTAMDAVSNSQTAMDAVSASAVAMDAVAASTIAMDAAIASEDIALPTIVETETAMNEVSLSDLALDSLWESDVAWGMIRDLSMAVGKFAVGRAGLSGYDYADIDDVASSQTAMDAVSTSDTAMDAVSTSETAMDAVGGSQTAMDAVAGSQTAMDAVAASIMPRSALFDSDYAVSSLWAASPGARTILEEGGSPTLPHTYDDSRSGSSGTHLRIEDGSDISLPGNATSALEIEVVDSDDPYRRGLTLELDLSNATTLEFEMRADSVPDSRIDHGVEVDGSTLFSNSGNSSWTNRSVDVSEYSGTHDVLFFTDTDSWTGGDWMTYFSNINLI
Physico‐chemical
properties
protein length:504 AA
molecular weight: 52989,38200 Da
isoelectric point:4,05003
aromaticity:0,05357
hydropathy:-0,05813

Domains

Domains [InterPro]
DC_1194
STR
10–278
DC_1194
DC_1194
STR
273–503
DC_1194
AAR17458.1
1 504
Architecture
STR
STR 10-503 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Natrialba phage PhiCh1
[NCBI] 		114777 Uroviricota > Caudoviricetes > Vertoviridae > Myohalovirus alkaliphilum > Myohalovirus phiCh1
Host Natrialba magadii ATCC 43099
[NCBI] 		547559 Methanobacteriota > Halobacteria > Halobacteriales > Natrialbaceae > Natrialba > Natrialba magadii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR17458.1 [NCBI]
Genbank nucleotide accession
AY364843.1 [NCBI]
CDS location
range 1939 -> 3453
strand +
CDS
ATGAGTAAAATCTGGGAACCGAGCGGTGGCGTCGACGACAAGGTCCTCTTTGGGATGTACCCCGAGGACCTCGACGCCCAGGATCGACAAGAACTGTACGCTGAGGCGTTCGAGGATATCGTCAAGTCCTACTCGACGATGGCGACCGCCTGCCGGTATCAGGCGATCATCGATGAGATGATCGACGACGAAACTCGAGCCCAGCTGATCGCTGACACGCAGGCGGCGATGGAAGCGGTCAGTATCGCCCGGACCGCGATGGACTCGATCAGCGAGTCGTCCACAGCTATGGATCCGATCAGCGAGTCCATCGTCGCGATGGAGGCCGTGATCGATTCGGACGATATCGCGCTCCCCGCTGTCGTCGAGAGCCAGATCGCGATGGACGCGGTGAGCACGTCGCAGACCGCAATGGACGCGGTGAGCGACTCCCAGACGGCAATGGACGCGGTGAGCGACTCCCAGACGGCAATGGACGCGGTGAGCGTCTCCCAGACGGCGATGGACGCGGTGAGCGACTCCCAGACGGCAATGGACGCGGTGAGCAACTCCCAGACGGCAATGGACGCGGTGAGCGCGTCCGCCGTCGCGATGGACGCAGTCGCCGCCTCCACTATCGCGATGGATGCCGCGATCGCCTCGGAGGACATCGCGCTACCGACAATCGTCGAAACTGAGACGGCCATGAACGAGGTCAGTCTCTCCGATCTCGCGCTCGATTCGCTCTGGGAGAGCGACGTTGCGTGGGGGATGATCCGCGACCTCTCGATGGCCGTCGGGAAGTTCGCTGTGGGCCGAGCGGGCCTCAGCGGCTATGACTACGCCGATATCGACGATGTCGCCTCCTCTCAGACCGCGATGGACGCGGTAAGTACGTCCGACACCGCGATGGACGCGGTAAGTACGTCCGAAACAGCGATGGATGCGGTTGGGGGCTCCCAGACGGCGATGGACGCGGTTGCGGGCTCCCAGACGGCGATGGACGCGGTTGCGGCGTCCATCATGCCGCGAAGTGCGCTCTTCGACTCTGACTACGCTGTTTCCTCTCTTTGGGCGGCGTCTCCGGGCGCAAGGACTATCCTCGAAGAGGGAGGTTCACCGACGCTCCCGCACACCTACGACGACAGCCGTTCAGGATCGTCTGGGACACACCTCCGAATCGAAGACGGAAGCGACATCAGTCTCCCTGGAAACGCTACGTCGGCCCTCGAAATCGAGGTTGTTGATTCCGACGATCCCTACCGTCGTGGTCTCACATTGGAGTTGGATCTGAGCAACGCGACCACGCTCGAGTTCGAGATGCGAGCCGACTCCGTCCCTGACTCTCGTATTGATCACGGAGTCGAGGTTGACGGATCCACCCTATTCTCGAATAGCGGGAATAGCAGCTGGACGAATCGGAGCGTAGATGTTTCGGAGTACAGTGGTACCCACGACGTACTGTTCTTCACGGATACTGATTCGTGGACTGGCGGCGACTGGATGACCTACTTCAGCAATATAAACCTGATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4b69e4e35bbff78d1aed1f2034e8a6661123ed230ed95efba01adff254039f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Inversion within the haloalkaliphilic virus phi Ch1 DNA results in differential expression of structural proteins Rossler,N., Klein,R., Scholz,H. and Witte,A. 2004 15066030 GenBank