Protein

View in Explore
Genbank accession
YP_009846884.1 [GenBank]
Protein name
endo-N-acetylneuraminidase domain protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MVNVYNGANGTIIDGSCRIYYPWNGDNIINDGSSCIIKAWLGEEYKGIGLPLAKGIRFGGTYGGSTNCDIELIGSGMEAGWVDWGGIGGHNRVVVRGYNPSGVAQVGTPPSLNDVDVYVHGQSLEVIRQEMFQTRNSVAKITATGTSQSTAASIDKSVRTVGVSGGASNAGLKLPNSAFVGNGHKIQVTDVTGTAKKVYPNTGGNILGIGLNNPATVPGLGTIHLTVVDADAGEWLLG
Physico‐chemical
properties
protein length:238 AA
molecular weight: 24606,32980 Da
isoelectric point:6,05525
aromaticity:0,06723
hydropathy:-0,04496

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009846884.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0040
Central domain 11 199 190 0,6451
C-terminal 200 238 38 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-199
C-terminal
200-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4L372XY
[NCBI] 		2588520 Uroviricota > Caudoviricetes > Plateaulakevirus >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009846884.1 [NCBI]
Genbank nucleotide accession
NC_048772 [NCBI]
CDS location
range 43613 -> 44329
strand -
CDS
ATGGTGAACGTTTACAACGGCGCTAATGGGACGATAATTGATGGCTCTTGCCGGATATATTACCCGTGGAATGGCGATAACATTATAAACGACGGGTCAAGCTGCATAATAAAGGCGTGGCTTGGTGAGGAGTATAAAGGTATTGGCCTGCCTCTAGCTAAGGGGATTCGTTTCGGCGGTACTTACGGTGGGTCAACCAACTGTGATATTGAGCTGATCGGTAGCGGCATGGAAGCGGGCTGGGTAGATTGGGGCGGTATCGGTGGACATAACCGCGTCGTTGTGCGGGGATACAACCCTTCTGGGGTTGCGCAGGTCGGCACACCCCCCAGCCTCAATGATGTGGATGTCTATGTACACGGCCAATCACTAGAAGTCATTCGACAAGAGATGTTCCAGACAAGAAACTCAGTAGCAAAAATTACCGCAACTGGAACTTCCCAATCTACCGCAGCTAGTATAGACAAATCAGTACGTACGGTTGGGGTATCAGGAGGGGCAAGTAATGCTGGCCTGAAATTACCTAACTCAGCTTTTGTCGGCAATGGGCACAAAATTCAAGTGACTGACGTGACTGGTACAGCTAAAAAAGTGTATCCTAATACAGGGGGGAATATCCTGGGGATTGGGCTAAACAACCCTGCTACCGTTCCTGGGCTGGGTACTATTCATTTGACAGTAGTTGATGCAGATGCGGGTGAATGGCTGCTGGGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b79eaad490ebda055ecc8c8217aa31ba3ffd9833e42225f21b7ee11423c904f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7770
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W., Bai,M., Wang,Y. and Cui,X. 2019-07-05 — GenBank