Protein

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Genbank accession
CAB5508839.1 [GenBank]
Protein name
Phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARYFGVKQSEVVYFSVGAVLSGYKVIYDKESQRAYSLPTDIDSGTTAVSLSTAAVLVHSAGSVDLGALAVSREEYVTLPGSFDSGSTLNVKNELLTYTDGKYRWDGVLPKTLAAGSTPATTGGIGLGAWISVGDASAKQWTDRSFRKLQLLKSSGSFQDGGGAEAGMSALLNSNDNYYYTPLSGVINVTPGSLPDSNWKCVGFLNGYDIFDVRNWSENPSPTDSAGIIANTSAIQFMADSLGDGGCLLFPEGTTTRFNTINITNRDVTISGGGVVDGTIRVYCKTFAASSDIYMNTDIGNLTFSTTRNLSSAIELAYARMGSIHDIRDVRGYSNAIHVIPSTAVGGSSATAWGQMVNRWMVSNCHYGKGAEDGYTVDRFIYAEPSPGMQYPVADLVVTGNEGHAKVDHIYIDTIDGLTVSSNIMFFPGGSLGPTEKKNSHIRINNGGGWLNINDNKFFESGGTSVYLNKCTRFSLHDNLYAFGSQRSPVPQIVIDGTPLAGEYFTQGAIHDETIIMPGGEGIYVAAKNGRLKIHDCNIQDPCNAMYYYGAAAQPSPVGITVVSDTKLVEVFDNTTREGDNALAGVVNNVYRANIIDKLGSLGSVFVETVTRDLGLGSATSTIDVRPWDNVVFTTAAHFDLQFFVNGGPVKNVTLTHSGTANFTIINSLSTKLAGNTNLVVTPGSSITFRVNTDGSATEVSRAII
Physico‐chemical
properties
protein length:726 AA
molecular weight: 77263,38410 Da
isoelectric point:5,29912
aromaticity:0,09229
hydropathy:-0,08857

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
DC_0369
STR
1–725
DC_0369
IPR040775
RBD
91–156
IPR040775
CAB5508839.1
1 726
Architecture
ATT
STR
ATT 1-163 | STR 164-725 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB5508839.1
1 726
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9839
Central domain 242 623 383 0,9901
C-terminal 624 726 102 0,9824
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-623
C-terminal
624-726

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se_EM4
[NCBI] 		2736933 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5508839.1 [NCBI]
Genbank nucleotide accession
LR811968.1 [NCBI]
CDS location
range 77293 -> 79473
strand +
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCAACTGGAATCTTAACCAATAAACAAGCAGTAGCCCGTTACTTTGGGGTTAAGCAGAGTGAGGTAGTTTACTTCTCCGTCGGTGCTGTACTAAGTGGATATAAAGTTATCTATGACAAAGAATCACAGCGTGCTTACTCATTACCTACCGACATTGATTCTGGTACTACTGCCGTCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTCGTGAAGAATATGTAACCTTACCCGGTTCATTTGATTCTGGTTCTACGCTTAATGTTAAAAATGAACTACTTACTTATACAGATGGTAAGTATCGCTGGGATGGAGTATTACCTAAAACTTTAGCTGCTGGGTCTACTCCAGCAACAACTGGTGGTATTGGTTTAGGCGCGTGGATTAGTGTTGGTGATGCTTCAGCAAAACAATGGACAGATAGATCATTCAGGAAATTACAACTATTAAAATCTTCTGGTTCTTTCCAGGATGGTGGTGGAGCTGAAGCTGGAATGTCAGCCCTGCTAAATTCTAATGATAATTATTATTACACGCCATTATCTGGAGTAATAAACGTAACACCTGGGTCATTACCTGATTCAAACTGGAAATGCGTTGGTTTCTTGAATGGTTATGATATTTTTGATGTTCGTAATTGGTCAGAAAACCCATCTCCTACTGACTCAGCCGGTATAATCGCTAACACATCTGCCATCCAATTTATGGCAGATTCGCTTGGGGATGGCGGTTGCTTACTCTTCCCGGAGGGCACCACCACAAGATTCAATACGATCAATATCACAAACCGAGATGTGACGATTTCTGGTGGCGGCGTGGTGGATGGTACAATTCGGGTTTACTGCAAAACATTCGCAGCAAGTTCAGACATATACATGAACACAGATATAGGAAATCTAACATTTTCAACAACCAGAAATCTATCATCTGCTATAGAACTCGCTTACGCCAGAATGGGGAGCATACACGACATTCGTGATGTCAGAGGTTATAGCAATGCCATTCATGTCATTCCAAGCACGGCTGTTGGTGGTTCGTCAGCAACCGCATGGGGCCAGATGGTAAACCGCTGGATGGTGTCAAATTGTCATTACGGGAAAGGCGCAGAAGATGGCTACACCGTGGATCGGTTTATTTATGCAGAGCCATCACCCGGTATGCAGTACCCTGTTGCTGACTTGGTTGTTACTGGTAATGAGGGCCATGCCAAAGTAGATCATATTTATATAGATACTATTGATGGGTTGACTGTATCTAGTAATATTATGTTTTTCCCTGGGGGATCGCTTGGACCAACAGAAAAAAAAAACTCCCATATTAGAATAAATAATGGTGGTGGGTGGCTTAATATTAATGATAACAAATTTTTTGAGTCGGGTGGCACGAGTGTGTATCTGAATAAATGCACCAGATTCAGTCTACACGACAACCTGTATGCTTTTGGTTCTCAGCGGTCCCCTGTTCCTCAAATCGTCATTGATGGTACGCCATTAGCAGGTGAGTATTTTACGCAAGGCGCTATCCATGACGAGACTATCATCATGCCGGGTGGCGAAGGTATTTATGTTGCGGCTAAAAATGGGCGGCTAAAAATACACGACTGCAACATCCAGGACCCATGCAACGCAATGTATTACTACGGGGCTGCGGCTCAACCATCTCCAGTAGGGATAACGGTTGTATCGGATACTAAACTGGTGGAGGTCTTCGATAACACCACTCGCGAGGGGGATAATGCCCTGGCGGGAGTCGTCAACAACGTATACCGCGCCAATATTATCGATAAGCTAGGTTCCTTAGGTTCTGTATTCGTCGAAACCGTTACTCGGGATTTGGGCTTGGGGTCAGCAACATCTACTATAGACGTACGTCCGTGGGATAATGTTGTGTTCACAACCGCAGCCCATTTTGACCTTCAGTTCTTTGTGAATGGTGGACCCGTTAAGAATGTAACGCTAACGCATTCAGGAACAGCTAATTTCACGATTATCAATAGCCTGTCAACCAAACTGGCCGGTAATACAAACCTTGTTGTAACCCCCGGCAGTAGTATAACTTTCCGGGTTAACACTGACGGAAGCGCAACAGAAGTTAGTCGCGCTATCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a025ec7ef2cac9071890bb7919c7887dde4842dcdac2dd6c6e2e7fa82250982a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7619
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50