Protein

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Genbank accession
XUU32128.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATNLGAVFPTKKASEWTALNPLLMKGQGAYEADTSALKIGDGSTLYNDLPYFVGSRSEVSQDQLSSAIDQMDLVTQAEAKLAYAGFIDAPKDGSTPALSAFQEAITSAGGRPLFVPPGDYLFNDSLTGRANLTFAPGARILQSVNKPAFELTGTGSQGQASRGLQSSAAAGQNIINCNTVGLVVGDWILIRSAEVFPNSVAGSKIGELHRVRQIDGTTQLRTVANLDYSYAPTTSSVVKFGMMQGVRLLGAGEFVNTIGANMKVPMLRFTACADLAVDASVVGAGGPGVTVSADTLFAVRARVRDSLNDEGNGNFGYGVEAFGASCHGDVHVDMVGGRHAFTTTSGATTSSVPRHITVTGTAEGLTNTAWDSHEEGEFIHFRGVQAFGCRNGAIKHRAPRSTIINPVVRNCLGIGVRFAPSAYGGALHGGDLREIRYLSEGSPGVGVQIEAPGVTVGGDPRIECDDQGILVLTGGDMSRVKSGTLLAGARGNAATDIGIEYQGNSANHRVDRGVSIEASAVGVKAVSTVTDVRVAPLRYEGVPTRVSGAIHLTSEPLRRRLVNVPGNGAGRGSISTVTSGRAYISPLVIEDDEPWTSLVPTIGVSTAGAAGDTVEVAIYDTARNRLATTGKQAVLDTTGVKTLPAISFVPILGKRYLAVTQFVLSGSTLAIHAGTFANVMGAAMAGTTDETYDGSYVAAANPLPAQITGTPVVGAISVFPWVQFTGLQS
Physico‐chemical
properties
protein length:730 AA
molecular weight: 75654,25990 Da
isoelectric point:5,99017
aromaticity:0,06438
hydropathy:0,04151

Domains

Domains [InterPro]
SSF69349
STR
8–68
SSF69349 IPR012334 DC_1203
IPR011050
STR
90–420
IPR011050
IPR011050
STR
91–424
IPR011050
XUU32128.1
1 730
Architecture
STR
STR
RBD
STR 8-68 | STR 89-424 | RBD 437-728 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32128.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9847
Central domain 99 549 452 0,9910
C-terminal 550 730 180 0,9941
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-549
C-terminal
550-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage RedRaider
[NCBI] 		3412525 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32128.1 [NCBI]
Genbank nucleotide accession
PV329801 [NCBI]
CDS location
range 11773 -> 13965
strand +
CDS
ATGGCGACCAACCTCGGGGCCGTGTTCCCGACGAAGAAGGCCTCGGAGTGGACCGCGCTCAACCCTCTGCTGATGAAGGGCCAGGGGGCTTACGAGGCGGACACCAGTGCCTTGAAGATCGGCGACGGGTCCACGCTGTACAACGACCTCCCCTACTTCGTCGGATCGCGAAGCGAAGTATCCCAGGACCAACTGAGTTCGGCCATCGACCAGATGGATTTGGTTACCCAGGCCGAGGCGAAGTTGGCGTATGCCGGTTTCATTGACGCCCCGAAAGACGGCTCGACTCCTGCTCTTTCGGCGTTCCAGGAAGCTATCACGTCCGCTGGGGGTCGCCCCTTGTTCGTGCCGCCAGGGGACTATCTCTTCAACGACTCGCTTACTGGCCGTGCGAATCTCACTTTCGCTCCCGGAGCTCGGATTTTGCAGTCGGTCAACAAACCTGCGTTCGAGCTGACCGGAACTGGCTCCCAAGGTCAAGCCTCCCGGGGTCTGCAGTCGTCCGCGGCGGCCGGACAGAACATCATCAATTGCAATACGGTCGGCCTGGTCGTCGGAGACTGGATTCTGATCCGGTCGGCCGAGGTATTTCCGAACAGCGTCGCCGGGAGCAAGATCGGAGAGCTCCATCGAGTCCGCCAGATCGACGGAACGACCCAACTCCGCACCGTGGCGAACCTCGACTACAGCTACGCCCCCACTACTTCGTCGGTGGTGAAGTTCGGCATGATGCAGGGGGTTCGTCTGCTCGGAGCAGGCGAGTTCGTCAACACGATCGGCGCGAACATGAAGGTGCCGATGCTTCGCTTCACCGCGTGCGCTGACCTGGCAGTCGACGCCTCGGTGGTTGGCGCCGGAGGCCCGGGAGTGACCGTGTCGGCGGATACTCTCTTCGCTGTCCGCGCGAGGGTGCGCGACTCACTGAACGACGAGGGGAACGGAAACTTCGGATACGGGGTCGAAGCGTTCGGGGCCTCCTGCCACGGTGACGTCCACGTGGACATGGTCGGCGGCCGACATGCGTTCACGACGACGTCGGGAGCGACCACCTCATCGGTTCCTCGGCACATCACCGTCACCGGAACCGCAGAGGGGTTGACCAACACGGCCTGGGACTCTCATGAAGAGGGAGAGTTCATCCACTTCCGCGGAGTTCAGGCATTCGGCTGCCGTAACGGTGCGATCAAGCATCGAGCCCCTCGGAGCACGATCATCAATCCGGTCGTCCGTAACTGTCTCGGGATCGGGGTGCGCTTCGCTCCCTCAGCCTATGGAGGAGCCCTGCACGGAGGGGATCTCCGAGAGATTCGCTACCTCTCGGAAGGCTCCCCAGGGGTCGGAGTGCAGATCGAGGCCCCCGGCGTCACCGTCGGCGGAGATCCCCGCATCGAGTGTGACGATCAGGGCATCCTCGTGCTCACCGGCGGGGATATGTCGCGAGTCAAGTCGGGGACTCTGCTGGCGGGAGCGCGAGGAAATGCTGCCACCGACATCGGGATTGAGTATCAGGGCAACTCGGCGAATCATCGGGTTGATCGAGGGGTCTCGATCGAAGCGAGCGCGGTGGGGGTCAAGGCTGTTTCAACCGTCACTGATGTTCGCGTTGCTCCCCTTCGATACGAAGGGGTCCCGACGCGCGTCAGCGGGGCTATCCACTTGACTTCCGAGCCTCTTCGGCGGCGTCTGGTCAACGTTCCCGGAAATGGAGCCGGACGGGGGTCAATCAGCACCGTTACTAGTGGTCGTGCATACATCAGCCCCCTGGTGATTGAGGACGACGAACCTTGGACCTCGTTGGTGCCGACCATTGGGGTGTCCACGGCGGGAGCAGCAGGAGACACCGTGGAGGTCGCGATCTACGACACCGCGCGGAACCGGTTGGCGACCACCGGCAAACAGGCAGTTCTGGACACGACCGGGGTCAAGACCCTCCCCGCGATTTCATTCGTCCCGATACTGGGGAAGCGGTACCTGGCTGTCACCCAGTTCGTGCTGTCGGGGTCAACTCTTGCTATCCATGCGGGAACCTTCGCGAACGTCATGGGGGCAGCCATGGCAGGGACTACCGACGAGACCTACGACGGAAGCTATGTTGCAGCGGCGAACCCCTTGCCTGCTCAGATCACCGGGACCCCGGTGGTGGGGGCGATCTCGGTCTTCCCCTGGGTCCAGTTCACTGGGCTACAATCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
83850dd29b36827f40a8827b58276954fb5a3f724d68e30c9fdee55250836b26
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50