Protein

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Genbank accession
QPB11416.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPPAIVAAVVAVGASAAGAFGVISLSTAMIIATTATVAGALLTKQSIPSLGNYTPQAERKQVLRSSAAPCTYIYGKTVVSGTLFFAEEQAGDQDDGEWVHLALAIADHPIHKISKIWLGDDLIETYGSHATYEVHIDRKTADPFMLKNCRSWKSSMIGRGITWLRISLKFSQEVFPAGLPNIKCEVYGALVTDPRTGLKAWTDNAALIIRDVYLSPLMNVPVSDLDDNYFKQSANICDEMVTNSDGSLEKRYTINGVFDASEAIVSILDDMHEACGGEPTFSGGKHGLLVGAYYGPAIYDLTDDHIISDVNIVPETQYSDKVNVISGTFVDPKQGYVEADFPPIVMQDWVEEDGAEFKQDLKLRFVTSEFTAQRLANIILKRKKLGRTIELTANFHAYRFRTGFYVRLTVKDLGINRQEFRVVGWEMSGATGVKLTLRQETATLWGDVVGKPLERPDLVDLPKGNVVPPTSLEYVTESVGDVVQGYLRWSNSGNISYNAVQIFDSDGALVFNVNVPSNKVNLNGLKSGVYTAQVVAYGVSGGKSAPAVAQIDVRAPSAPTSIRLESGFYSIGIYPTSANSQPVTFEFWFSETELSDQDITKKGSKLGSGDFWIKDGANPAITYYFYVRAVSIYGVSGFARISGRASDKADEILDIIGERWRDSEIGKEIEDIKNDYGDILANNRALEDVIQQNKDDLEKLNVAVRKSFQSIGDVTFEIRQNKGTNEAEIKRVEGVVATETEARAQSFEYLNAKIEGVNGTLTGELNTFKDVYVTDKAALVTWQQEAVTRFEHNESSILEIQETTTTLTESVAQNTRQLTAQQTSINEQGEKITKAEGRITDVEKVSATNTQSITENKQAADSRFASNEASLNQVQQTAASAEDAAVKFAVQMAAESKKTQENVNESKAEILDVKNAIADQELAMAQQISQLKTEFNGNIATINGQLKVVSDATSSNTSAIQILATDVGVAKGQISSIQTSITTLETSVQETKDQLYAQTQSVDQRFTAVNQTINKTKTDLEKSIASSNQTLSSQIATVDGKAVQAGKDAATANTNAGKAQTVADNASKSINDYKTANDKEIVLVKADIATNKQAIATEKQARTTDITNLQSSLNSTNAKVEQKMEAVVEHNGTVAATYTLRAGIELPNGTYKSAGLFIGVSGGANPVASVGVNADNFVVMNNRNGKLEAVFQVDPDGNVVIRNALISKLFVEEAIVGSTLSSADFSATKGIQIDFKNGKIIANGGTWGAGLNVGNPSGKGLSITDQTILVRDENGRLRFACGYIKGLV
Physico‐chemical
properties
protein length:1288 AA
molecular weight: 139214,33740 Da
isoelectric point:5,04164
aromaticity:0,07143
hydropathy:-0,22943

Domains

Domains [InterPro]
DC_0187
STR
1–912
DC_0187 DC_0515
IPR053171
Unmapped
509–1052
IPR053171 IPR015406
IPR057587
ATT
558–656
IPR057587 Coil DC_0068
QPB11416.1
1 1288
Architecture
STR
ATT
STR
RBD
STR 1-557 | ATT 558-656 | STR 657-991 | RBD 992-1288
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB11416.1
1 1288
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,7357
Central domain 126 324 200 0,0890
C-terminal 325 1288 963 0,0500
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-324
C-terminal
325-1288

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage Kokobel2
[NCBI] 		2783541 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB11416.1 [NCBI]
Genbank nucleotide accession
MW145138.1 [NCBI]
CDS location
range 31520 -> 35386
strand +
CDS
ATGCCGCCAGCAATAGTCGCCGCTGTCGTAGCAGTGGGGGCGTCCGCTGCTGGGGCATTTGGTGTCATATCACTGTCTACTGCTATGATAATCGCCACAACTGCTACGGTTGCTGGCGCTCTCCTCACTAAGCAAAGCATCCCATCTTTAGGTAATTATACGCCTCAGGCAGAGAGAAAGCAAGTGTTGCGGTCGTCAGCGGCCCCCTGTACTTATATCTATGGGAAAACTGTGGTGTCTGGCACACTTTTCTTCGCGGAAGAACAGGCGGGAGACCAAGACGACGGCGAATGGGTTCATTTAGCCCTAGCAATTGCCGACCACCCTATCCACAAGATATCCAAAATCTGGTTGGGTGATGACTTGATTGAAACGTATGGATCGCACGCTACATATGAAGTCCATATAGATCGCAAAACCGCCGACCCGTTCATGCTGAAAAATTGTCGGTCATGGAAAAGTTCTATGATTGGGCGCGGTATTACTTGGCTACGTATTAGCCTGAAGTTCAGTCAGGAAGTTTTCCCAGCTGGTCTTCCTAATATCAAGTGTGAAGTCTACGGTGCTCTAGTCACCGACCCGCGCACAGGGTTGAAAGCGTGGACAGATAACGCGGCCCTGATAATTAGAGATGTTTATCTATCCCCTCTGATGAACGTGCCAGTGTCGGATTTGGATGACAACTATTTCAAACAGTCGGCCAATATCTGTGACGAAATGGTCACAAACTCTGACGGTTCCCTTGAAAAGCGGTATACTATCAACGGGGTATTTGATGCATCTGAAGCCATAGTGTCTATTCTTGACGACATGCACGAGGCGTGCGGCGGGGAACCTACCTTCTCTGGGGGTAAGCACGGTTTGTTGGTGGGCGCATATTACGGCCCAGCAATATATGACCTGACAGACGACCATATTATTAGTGATGTAAACATAGTGCCAGAAACTCAATACTCTGACAAGGTTAACGTCATCAGTGGCACTTTTGTAGACCCTAAACAGGGGTATGTGGAAGCCGACTTCCCTCCCATCGTGATGCAAGACTGGGTAGAGGAAGACGGTGCGGAGTTCAAACAAGATCTAAAACTGCGCTTCGTCACGTCCGAATTCACGGCCCAACGGTTGGCGAATATCATACTCAAGCGTAAGAAACTGGGTAGAACCATTGAGCTAACAGCCAACTTTCATGCGTATAGATTTCGCACTGGCTTCTATGTTAGATTAACAGTGAAAGACCTTGGCATAAACAGGCAGGAATTCCGTGTTGTCGGCTGGGAGATGTCAGGGGCTACTGGAGTCAAACTTACACTCAGACAGGAGACAGCCACCCTATGGGGCGATGTAGTAGGAAAACCTCTGGAGAGACCTGACCTTGTGGACCTACCGAAAGGCAATGTTGTGCCACCGACTTCACTAGAATATGTCACTGAATCTGTTGGTGATGTAGTGCAGGGATATTTAAGATGGTCTAACTCTGGCAATATCTCCTATAACGCCGTACAAATATTTGACTCGGACGGTGCTTTGGTCTTCAACGTCAACGTGCCATCCAACAAAGTGAATCTGAATGGCCTCAAATCCGGTGTGTATACCGCGCAAGTGGTAGCGTATGGTGTCAGCGGCGGGAAGTCGGCCCCAGCGGTCGCACAAATAGACGTACGAGCGCCATCGGCGCCGACATCTATCAGGTTGGAGTCCGGCTTCTACTCCATAGGCATATACCCTACATCGGCCAACTCACAACCGGTCACGTTCGAATTTTGGTTTAGCGAAACGGAACTATCAGACCAAGATATAACTAAAAAAGGCTCCAAACTGGGTTCCGGCGATTTCTGGATTAAGGATGGCGCCAACCCCGCCATCACATACTACTTCTATGTGCGGGCCGTATCTATTTATGGTGTTTCGGGCTTTGCTAGGATATCGGGCAGGGCGTCTGATAAGGCCGACGAAATTTTGGATATTATCGGCGAGAGGTGGCGAGACTCTGAGATAGGTAAAGAAATTGAGGACATCAAGAATGACTATGGTGATATACTAGCGAACAACAGGGCGCTGGAAGATGTCATTCAGCAAAATAAAGATGACCTAGAAAAATTGAATGTAGCAGTTCGTAAGAGCTTCCAAAGCATCGGGGATGTGACCTTTGAAATCCGTCAAAATAAAGGTACGAACGAAGCTGAAATCAAACGTGTGGAGGGCGTTGTAGCGACAGAAACGGAAGCGAGAGCGCAATCTTTTGAATATCTCAATGCGAAAATAGAAGGTGTTAACGGCACACTCACAGGAGAACTAAACACCTTTAAAGACGTGTATGTCACAGACAAGGCCGCGCTTGTAACATGGCAGCAAGAGGCTGTCACAAGGTTTGAACACAATGAAAGTAGCATCTTGGAAATTCAAGAAACAACTACGACGCTAACAGAAAGCGTGGCGCAAAACACAAGGCAATTGACTGCACAGCAGACAAGTATTAATGAACAAGGGGAAAAGATTACAAAAGCGGAAGGAAGAATCACAGATGTTGAGAAAGTTTCTGCTACTAACACGCAATCCATTACTGAAAATAAACAAGCCGCGGATTCTAGATTCGCAAGCAATGAAGCGTCGCTAAATCAAGTACAACAGACTGCTGCAAGTGCAGAGGACGCTGCCGTTAAATTTGCCGTTCAAATGGCGGCGGAAAGTAAGAAAACACAAGAAAACGTGAACGAGTCCAAGGCGGAAATCTTGGACGTTAAAAACGCGATTGCGGATCAAGAGCTTGCAATGGCTCAACAAATAAGCCAGCTTAAAACTGAATTCAATGGAAACATTGCAACTATTAACGGTCAGCTTAAAGTTGTATCTGATGCGACAAGCTCAAATACCTCCGCGATCCAGATTTTAGCAACGGACGTCGGTGTTGCTAAGGGGCAGATATCCAGCATTCAAACCAGCATAACCACTCTAGAGACGTCTGTACAAGAAACAAAAGATCAACTTTATGCACAGACACAGTCGGTTGACCAGAGATTTACGGCGGTCAATCAAACCATAAATAAAACTAAGACGGACTTGGAAAAATCTATCGCGTCCTCGAATCAAACATTAAGTTCACAGATTGCAACAGTAGACGGGAAAGCAGTGCAAGCAGGTAAGGATGCCGCAACGGCAAACACCAATGCGGGCAAAGCACAGACTGTCGCTGACAATGCATCTAAAAGCATAAACGATTATAAAACAGCAAACGATAAAGAAATCGTGCTGGTTAAAGCCGACATAGCGACAAATAAACAGGCTATTGCGACGGAAAAGCAAGCAAGAACTACAGATATCACAAACTTACAATCATCTTTAAATAGCACCAACGCAAAAGTTGAACAGAAGATGGAAGCAGTTGTTGAACACAATGGAACGGTGGCGGCAACTTACACATTAAGAGCAGGAATAGAGTTACCAAACGGAACATATAAATCTGCGGGTTTGTTTATAGGCGTTAGCGGAGGAGCCAACCCCGTTGCATCCGTCGGCGTGAATGCTGATAACTTTGTGGTAATGAATAATCGCAACGGTAAGCTGGAGGCGGTGTTCCAAGTAGATCCCGACGGCAACGTTGTCATTAGAAACGCCCTCATCAGCAAGTTATTTGTAGAAGAAGCAATTGTCGGGTCTACCCTTTCGTCTGCGGACTTTAGCGCAACTAAGGGTATACAGATAGACTTTAAAAATGGTAAAATTATTGCTAATGGCGGAACATGGGGCGCAGGCCTCAATGTGGGGAATCCCTCTGGGAAGGGTCTATCTATCACAGACCAAACGATACTTGTGAGGGATGAGAATGGTAGACTTCGTTTTGCGTGTGGTTATATTAAGGGGTTGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ab31d070289f08517beb91968b5e9a4ffabfeddbef2fd46eed1913bb1c8beea
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50